Evidence map›Paper›PMID 23034801›Full record

ArticleNucleic acids research2012

SPOC1 modulates DNA repair by regulating key determinants of chromatin compaction and DNA damage response.

Andreas Mund, Tobias Schubert, Hannah Staege, Sarah Kinkley, Kerstin Reumann, Malte Kriegs, Lauriane Fritsch, Valentine Battisti, Slimane Ait-Si-Ali, Anne-Sophie Hoffbeck and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
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  7. Tuning the Orchestra: HCMV vs. Innate Immunity.Frontiers in microbiology · 2020
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  10. Early Nuclear Events after Herpesviral Infection.Journal of clinical medicine · 2019
    Review
  11. Article
  12. Article
  13. Around and beyond 53BP1 Nuclear Bodies.International journal of molecular sciences · 2017
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Andreas MundHeinrich-Pette-Institute, Leibniz-Institute for Experimental Virology, Department of General Virology, Martinistrasse 52, 20251 Hamburg, Germany.
Tobias Schubert
Hannah Staege
Sarah Kinkley
Kerstin Reumann
Malte Kriegs
Lauriane Fritsch
Valentine Battisti
Slimane Ait-Si-Ali
Anne-Sophie Hoffbeck
Evi Soutoglou
Hans Will
Leibniz Institute of Virology (LIV) · DEInstitut de génétique et de biologie moléculaire et cellulaire · FRCentre National de la Recherche Scientifique · FREpigénétique et Destin Cellulaire · FRSorbonne Paris Cité · FRUniversität Hamburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Survival time-associated plant homeodomain (PHD) finger protein in Ovarian Cancer 1 (SPOC1, also known as PHF13) is known to modulate chromatin structure and is essential for testicular stem-cell differentiation. Here we show that SPOC1 is recruited to DNA double-strand breaks (DSBs) in an ATM-dependent manner. Moreover, SPOC1 localizes at endogenous repair foci, including OPT domains and accumulates at large DSB repair foci characteristic for delayed repair at heterochromatic sites. SPOC1 depletion enhances the kinetics of ionizing radiation-induced foci (IRIF) formation after γ-irradiation (γ-IR), non-homologous end-joining (NHEJ) repair activity, and cellular radioresistance, but impairs homologous recombination (HR) repair. Conversely, SPOC1 overexpression delays IRIF formation and γH2AX expansion, reduces NHEJ repair activity and enhances cellular radiosensitivity. SPOC1 mediates dose-dependent changes in chromatin association of DNA compaction factors KAP-1, HP1-α and H3K9 methyltransferases (KMT) GLP, G9A and SETDB1. In addition, SPOC1 interacts with KAP-1 and H3K9 KMTs, inhibits KAP-1 phosphorylation and enhances H3K9 trimethylation. These findings provide the first evidence for a function of SPOC1 in DNA damage response (DDR) and repair. SPOC1 acts as a modulator of repair kinetics and choice of pathways. This involves its dose-dependent effects on DNA damage sensors, repair mediators and key regulators of chromatin structure.

Indexed as

DNA RepairCell LineChromatinDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA End-Joining RepairGamma RaysHeterochromatinHistone-Lysine N-MethyltransferaseHumansRadiation ToleranceRecombinational DNA RepairRepressor ProteinsTranscription FactorsTripartite Motif-Containing Protein 28ChromatinDNA-Binding ProteinsHeterochromatinHistone-Lysine N-MethyltransferasePHF13 protein, humanRepressor ProteinsTranscription FactorsTRIM28 protein, humanTripartite Motif-Containing Protein 28

Identifiers

PMID23034801
PMCPMC3526275
OpenAlexW2057984724

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.