ArticleBMC genomics2012
Construction and analysis of a high-density genetic linkage map in cabbage (Brassica oleracea L. var. capitata).
Article in BMC genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
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41 citing papers in PubMed.
- Discovery and validation of SSR marker-based QTL governing fresh pod yield in dolichos bean (Lablab purpureus L. Sweet).Scientific reports · 2025Article
- Identification of candidate genes and genomic prediction of soybean fatty acid components in two soybean populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Construction of a high-density genetic map based on large-scale marker development in Coix lacryma-jobi L. using specific-locus amplified fragment sequencing (slaf-seq).Scientific reports · 2024Article
- Sulforaphane-Enriched Extracts from Broccoli Exhibit Antimicrobial Activity against Plant Pathogens, Promising a Natural Antimicrobial Agent for Crop Protection.Biomolecules · 2024Article
- Article
- Genetic dissection of morphological variation between cauliflower and a rapid cycling Brassica oleracea line.G3 (Bethesda, Md.) · 2023Article
- Genome-wide analysis-based single nucleotide polymorphism marker sets to identify diverse genotypes in cabbage cultivars (Brassica oleracea var. capitata).Scientific reports · 2022Article
- Molecular karyotypes of loquat (Plant methods · 2020Article
- Identification of Chromosomes and Chromosome Rearrangements in Crop Brassicas andFrontiers in plant science · 2020Article
- A high-density genetic map constructed using specific length amplified fragment (SLAF) sequencing and QTL mapping of seed-related traits in sesame (Sesamum indicum L.).BMC plant biology · 2019Article
- Article
- Linkage mapping and quantitative trait loci analysis of sweetness and other fruit quality traits in papaya.BMC plant biology · 2019Article
- Article
- Current understanding of male sterility systems in vegetable Brassicas and their exploitation in hybrid breeding.Plant reproduction · 2019Review
- Proposal of a New Hybrid Breeding Method Based on Genotyping, Inter-Pollination, Phenotyping and Paternity Testing of Selected Elite FFrontiers in plant science · 2019Article
- Article
- Construction of a High-Density Genetic Map and Identification of Loci Related to Hollow Stem Trait in Broccoli (Frontiers in plant science · 2019Article
- High-Density Genetic Map Construction and Identification of QTLs Controlling Oleic and Linoleic Acid in Peanut using SLAF-seq and SSRs.Scientific reports · 2018Article
- QTL Mapping of Fiber-Related Traits Based on a High-Density Genetic Map in Flax (Frontiers in plant science · 2018Article
- Speciation Success of Polyploid Plants Closely Relates to the Regulation of Meiotic Recombination.Frontiers in plant science · 2018Article
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Authors and funding
12 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundBrassica oleracea encompass a family of vegetables and cabbage that are among the most widely cultivated crops. In 2009, the B. oleracea Genome Sequencing Project was launched using next generation sequencing technology. None of the available maps were detailed enough to anchor the sequence scaffolds for the Genome Sequencing Project. This report describes the development of a large number of SSR and SNP markers from the whole genome shotgun sequence data of B. oleracea, and the construction of a high-density genetic linkage map using a double haploid mapping population.
resultsThe B. oleracea high-density genetic linkage map that was constructed includes 1,227 markers in nine linkage groups spanning a total of 1197.9 cM with an average of 0.98 cM between adjacent loci. There were 602 SSR markers and 625 SNP markers on the map. The chromosome with the highest number of markers (186) was C03, and the chromosome with smallest number of markers (99) was C09.
conclusionsThis first high-density map allowed the assembled scaffolds to be anchored to pseudochromosomes. The map also provides useful information for positional cloning, molecular breeding, and integration of information of genes and traits in B. oleracea. All the markers on the map will be transferable and could be used for the construction of other genetic maps.
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