Evidence map›Paper›PMID 23031574›Full record

ArticleBiochimica et biophysica acta2013

Insight into the modulation of Shaw2 Kv channels by general anesthetics: structural and functional studies of S4-S5 linker and S6 C-terminal peptides in micelles by NMR.

Jin Zhang, Xiaoguang Qu, Manuel Covarrubias, Markus W Germann

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Structures ofBiochemistry · 2023
    Article
  2. Propofol inhibits prokaryotic voltage-gated NaThe Journal of general physiology · 2018
    Article
  3. Gambierol and n-alkanols inhibit Shaker Kv channel via distinct binding sites outside the K(+) pore.Toxicon : official journal of the International Society on Toxinology · 2016
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jin ZhangDepartment of Chemistry, Georgia State University, Atlanta, GA 30303, USA.
Xiaoguang Qu
Manuel Covarrubias
Markus W Germann

Funding

MAPPING THE ALCOHOL SITE OF A NEURONAL POTASSIUM CHANNELR01AA010615 · NIAAA · THOMAS JEFFERSON UNIVERSITY · PI COVARRUBIAS, MANUEL L · 1997 to 2011
$2.2M
NIAAA NIH HHS R01 AA010615
6 · The paper itself

Abstract

The modulation of the Drosophila Shaw2 Kv channel by 1-alkanols and inhaled anesthetics is correlated with the involvement of the S4-S5 linker and C-terminus of S6, and consistent with stabilization of the channel's closed state. Structural analysis of peptides from S4-S5 (L45) and S6 (S6c), by nuclear magnetic resonance and circular dichroism spectroscopy supports that an α-helical conformation was adopted by L45, while S6c was only in an unstable/dynamic partially folded α-helix in dodecylphosphocholine micelles. Solvent accessibility and paramagnetic probing of L45 revealed that L45 lies parallel to the surface of micelles with charged and polar residues pointing towards the solution while hydrophobic residues are buried inside the micelles. Chemical shift perturbation introduced by 1-butanol on residues Gln320, Thr321, Phe322 and Arg323 of L45, as well as Thr423 and Gln424 of S6c indicates possible anesthetic binding sites on these two important components in the channel activation apparatus. Diffusion measurements confirmed the association of L45, S6c and 1-butanol with micelles which suggests the capability of 1-butanol to influence a possible interaction of L45 and S6c in the micelle environment.

Indexed as

Micelles1-ButanolAnesthetics, GeneralAnimalsBinding SitesCell MembraneCircular DichroismDiffusionDrosophila melanogasterDrosophila ProteinsImaging, Three-DimensionalKineticsMagnetic Resonance SpectroscopyModels, StatisticalPeptidesPhosphorylcholine1-ButanolAnesthetics, GeneraldodecylphosphocholineDrosophila ProteinsMicellesPeptidesPhosphorylcholineShaw Potassium ChannelsShaw protein, DrosophilaSolvents

Identifiers

PMID23031574
PMCPMC5842808

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.