Evidence map›Paper›PMID 23031429›Full record

Trial reportTwin research and human genetics : the official journal of the International Society for Twin Studies2012

A genome-wide association study of monozygotic twin-pairs suggests a locus related to variability of serum high-density lipoprotein cholesterol.

Ida Surakka, John B Whitfield, Markus Perola, Peter M Visscher, Grant W Montgomery, Mario Falchi, Gonneke Willemsen, Eco J C de Geus, Patrik K E Magnusson, Kaare Christensen and 19 more

Open access · bronzeAbstract readClinical TrialMulticenter StudyTwin Study
In one paragraph

Trial report in Twin research and human genetics : the official journal of the International Society for Twin Studies, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Review
  6. The Danish Twin Registry: An Updated Overview.Twin research and human genetics : the official journal of the International Society for Twin Studies · 2019
    Article
  7. Article
  8. Association ofInternational journal of clinical and experimental pathology · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 13 institutions in 8 countries.

Ida SurakkaInstitute for Molecular Medicine, University of Helsinki, Finland.
John B Whitfield
Markus Perola
Peter M Visscher
Grant W Montgomery
Mario Falchi
Gonneke Willemsen
Eco J C de Geus
Patrik K E Magnusson
Kaare Christensen
Thorkild I A Sørensen
Kirsi H Pietiläinen
Taina Rantanen
Kaisa Silander
Elisabeth Widén
Juha Muilu
Iffat Rahman
Ulrika Liljedahl
Ann-Christine Syvänen
Aarno Palotie
Jaakko Kaprio
Kirsten O Kyvik
Nancy L Pedersen
Dorret I Boomsma
Tim Spector
Nicholas G Martin
Samuli Ripatti
Leena Peltonen
GenomEUtwin Project
University of Helsinki · FIKarolinska Institutet · SEQIMR Berghofer Medical Research Institute · AUVrije Universiteit Amsterdam · NLUniversity of Southern Denmark · DKUppsala University · SEBroad Institute · USHammersmith Hospital · GBInstitute for Molecular Medicine Finland · FIKing's College London · GBNovo Nordisk Foundation · DKThe University of Queensland · AUUniversity of Jyväskylä · FI

Funding

PILOT--GENETIC EPIDEMIOLOGY OF ALCOHOL AND TOBACCO CONSUMPTION IN CHINESE SAMPLEP50AA011998 · NIAAA · WASHINGTON UNIVERSITY · PI SHER, KENNETH JAMES · 1999 to 2008
$12.6M
THE GENETICS OF VULNERABILITY TO NICOTINE ADDICTIONSR01DA012854 · NIDA · WASHINGTON UNIVERSITY · PI MADDEN, PAMELA ANN · 2000 to 2013
$10.4M
Resource CoreP60AA011998 · NIAAA · WASHINGTON UNIVERSITY · PI MADDEN, PAMELA ANN · 2009 to 2013
$8.8M
Molecular Epidemiology of Alcoholism 3 - EDAC FamiliesR01AA013321 · NIAAA · WASHINGTON UNIVERSITY · PI HEATH, ANDREW C. · 2001 to 2005
$4.3M
Molecular Epidemiology of Alcoholism 2- Big SibshipsR01AA013320 · NIAAA · WASHINGTON UNIVERSITY · PI HEATH, ANDREW C. · 2003 to 2007
$3.1M
GENETIC &ENVIRONMENTAL INFLUENCES--BIOBEHAVIORAL AGINGR01AG010175 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI PEDERSEN, NANCY L · 1992 to 2006
$2.8M
Genetic Epidemiology of Pathological GamblingR01MH066206 · NIMH · UNIVERSITY OF MISSOURI-COLUMBIA · PI SLUTSKE, WENDY S · 2003 to 2007
$2.5M
Molecular Epidemiology of Alcoholism 1: Candidate GeneR01AA013326 · NIAAA · QUEENSLAND INSTITUTE OF MEDICAL RESEARCH · PI MARTIN, NICHOLAS G · 2001 to 2005
$2.1M
VARIATION IN THE EFFECTS OF ALCOHOL ON LIVER FUNCTIONR01AA014041 · NIAAA · QUEENSLAND INSTITUTE OF MEDICAL RESEARCH · PI WHITFIELD, JOHN B · 2003 to 2007
$2.1M
GENE-ENVIRONMENT INTERPLAY IN ALCOHOLISMK05AA017688 · NIAAA · WASHINGTON UNIVERSITY · PI HEATH, ANDREW C. · 2008 to 2017
$1.9M
DEMENTIA IN TWINSR01AG008724 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GATZ, MARGARET · 1990 to 2002
$1.4M
Cholesterol metabolism pathway: Cognitive change and Alzheimer's disease riskR01AG028555 · NIA · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI REYNOLDS, CHANDRA A · 2007 to 2010
$1.1M
NIAAA NIH HHS AA10248NIAAA NIH HHS AA11998NIAAA NIH HHS AA13320NIAAA NIH HHS AA13321NIAAA NIH HHS AA13326NIAAA NIH HHS AA14041NIAAA NIH HHS AA17688NIAAA NIH HHS K05 AA017688NIAAA NIH HHS P50 AA011998NIAAA NIH HHS R01 AA007535NIAAA NIH HHS R01 AA013320NIAAA NIH HHS R01 AA013321NIAAA NIH HHS R01 AA013326NIAAA NIH HHS R01 AA014041NIA NIH HHS AG028555NIA NIH HHS AG04563NIA NIH HHS AG08724NIA NIH HHS AG08861NIA NIH HHS AG10175NIA NIH HHS R01 AG008724NIA NIH HHS R01 AG010175NIA NIH HHS R01 AG028555NIDA NIH HHS DA12854NIDA NIH HHS R01 DA012854NIDA NIH HHS R56 DA012854NIMH NIH HHS MH66206NIMH NIH HHS R01 MH066206Wellcome Trust 079771Wellcome Trust 098051
6 · The paper itself

Abstract

Genome-wide association analysis on monozygotic twin-pairs offers a route to discovery of gene environment interactions through testing for variability loci associated with sensitivity to individual environment/lifestyle. We present a genome-wide scan of loci associated with intra-pair differences in serum lipid and apolipoprotein levels. We report data for 1,720 monozygotic female twin-pairs from GenomEUtwin project with 2.5 million SNPs, imputed or genotyped, and measured serum lipid fractions for both twins. We found one locus associated with intra-pair differences in high-density lipoprotein cholesterol, rs2483058 in an intron of SRGAP2, where twins carrying the C allele are more sensitive to environmental factors(P=3.98 x 10-8). We followed up the association in further genotyped monozygotic twins (N= 1,261),which showed a moderate association for the variant (P= 0.200, same direction of an effect). In addition,we report a new association on the level of apolipoprotein A-ll (P= 4.03 x 1 o-8).

Indexed as

Gene-Environment InteractionGenetic LociGenome-Wide Association StudyPolymorphism, Single NucleotideAdultAgedAged, 80 and overAllelesApolipoprotein A-IICholesterol, HDLFemaleGTPase-Activating ProteinsHumansIntronsMiddle AgedTwins, MonozygoticApolipoprotein A-IICholesterol, HDLGTPase-Activating ProteinsSRGAP2 protein, human

Identifiers

PMID23031429
PMCPMC4333218
OpenAlexW2008261722

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.