Evidence map›Paper›PMID 23029223›Full record

ArticlePloS one2012

Comparative analysis of FLC homologues in Brassicaceae provides insight into their role in the evolution of oilseed rape.

Xiaoxiao Zou, Ida Suppanz, Harsh Raman, Jinna Hou, Jing Wang, Yan Long, Christian Jung, Jinling Meng

Abstract readComparative Study
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Genes · 2023
    Article
  6. Article
  7. Evolutionary Dynamics ofPlants (Basel, Switzerland) · 2023
    Article
  8. Article
  9. Article
  10. Transposon insertions within alleles of BnaFT.A2 are associated with seasonal crop type in rapeseed.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Functional homoeologous alleles of CONSTANS contribute to seasonal crop type in rapeseed.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  15. Heterosis Derived From Nonadditive Effects of theFrontiers in plant science · 2021
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xiaoxiao ZouNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Ida Suppanz
Harsh Raman
Jinna Hou
Jing Wang
Yan Long
Christian Jung
Jinling Meng

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We identified nine FLOWERING LOCUS C homologues (BnFLC) in Brassica napus and found that the coding sequences of all BnFLCs were relatively conserved but the intronic and promoter regions were more divergent. The BnFLC homologues were mapped to six of 19 chromosomes. All of the BnFLC homologues were located in the collinear region of FLC in the Arabidopsis genome except BnFLC.A3b and BnFLC.C3b, which were mapped to noncollinear regions of chromosome A3 and C3, respectively. Four of the homologues were associated significantly with quantitative trait loci for flowering time in two mapping populations. The BnFLC homologues showed distinct expression patterns in vegetative and reproductive organs, and at different developmental stages. BnFLC.A3b was differentially expressed between the winter-type and semi-winter-type cultivars. Microsynteny analysis indicated that BnFLC.A3b might have been translocated to the present segment in a cluster with other flowering-time regulators, such as a homologue of FRIGIDA in Arabidopsis. This cluster of flowering-time genes might have conferred a selective advantage to Brassica species in terms of increased adaptability to diverse environments during their evolution and domestication process.

Indexed as

Alternative SplicingBase SequenceBrassica napusChromosome MappingChromosomes, PlantConserved SequenceGene Expression ProfilingMADS Domain ProteinsMolecular Sequence DataMultigene FamilyPhylogenyPlant LeavesPlant ProteinsQuantitative Trait LociSequence Analysis, DNASequence Homology, Nucleic AcidMADS Domain ProteinsPlant Proteins

Identifiers

PMID23029223
PMCPMC3459951

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.