Evidence map›Paper›PMID 23028923›Full record

ArticlePloS one2012

Microbial distribution and abundance in the digestive system of five shipworm species (Bivalvia: Teredinidae).

Meghan A Betcher, Jennifer M Fung, Andrew W Han, Roberta O'Connor, Romell Seronay, Gisela P Concepcion, Daniel L Distel, Margo G Haygood

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 90 citations in OpenAlex.

  1. Article
  2. Article
  3. Production of High-Value Antibiotics byACS sustainable chemistry & engineering · 2025
    Article
  4. Article
  5. Article
  6. Membrane vesicles can contribute to cellulose degradation bybioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. International journal of systematic and evolutionary microbiology · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. International journal of systematic and evolutionary microbiology · 2020
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Discovery of chemoautotrophic symbiosis in the giant shipwormProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Meghan A BetcherDivision of Environmental and Biomolecular Systems, Oregon Health & Science University, Beaverton, Oregon, United States of America.
Jennifer M Fung
Andrew W Han
Roberta O'Connor
Romell Seronay
Gisela P Concepcion
Daniel L Distel
Margo G Haygood
Oregon Health & Science University · USUniversity of the Philippines Diliman · PH

Funding

Diverse Drug Lead Compounds from Bacterial Symbionts in Philippine MollusksU19TW008163 · FIC · UNIVERSITY OF UTAH · PI HAYGOOD, MARGO GENEVIEVE · 2014 to 2018
$5.2M
Diverse drug lead compounds from bacterial symbionts in tropical marine mollusksU01TW008163 · FIC · OREGON HEALTH & SCIENCE UNIVERSITY · PI HAYGOOD, MARGO GENEVIEVE · 2008 to 2013
$4.3M
FIC NIH HHS IU01TW008163-01FIC NIH HHS U01 TW008163
6 · The paper itself

Abstract

Marine bivalves of the family Teredinidae (shipworms) are voracious consumers of wood in marine environments. In several shipworm species, dense communities of intracellular bacterial endosymbionts have been observed within specialized cells (bacteriocytes) of the gills (ctenidia). These bacteria are proposed to contribute to digestion of wood by the host. While the microbes of shipworm gills have been studied extensively in several species, the abundance and distribution of microbes in the digestive system have not been adequately addressed. Here we use Fluorescence In-Situ Hybridization (FISH) and laser scanning confocal microscopy with 16S rRNA directed oligonucleotide probes targeting all domains, domains Bacteria and Archaea, and other taxonomic groups to examine the digestive microbiota of 17 specimens from 5 shipworm species (Bankia setacea, Lyrodus pedicellatus, Lyrodus massa, Lyrodus sp. and Teredo aff. triangularis). These data reveal that the caecum, a large sac-like appendage of the stomach that typically contains large quantities of wood particles and is considered the primary site of wood digestion, harbors only very sparse microbial populations. However, a significant number of bacterial cells were observed in fecal pellets within the intestines. These results suggest that due to low abundance, bacteria in the caecum may contribute little to lignocellulose degradation. In contrast, the comparatively high population density of bacteria in the intestine suggests a possible role for intestinal bacteria in the degradation of lignocellulose.

Indexed as

AnimalsBacteriaBivalviaDigestive SystemGillsIn Situ HybridizationIntestinesRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID23028923
PMCPMC3447940
OpenAlexW2053504361

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.