Evidence map›Paper›PMID 23028906›Full record

ArticlePloS one2012

A comparative analysis of glomerulus development in the pronephros of medaka and zebrafish.

Koichiro Ichimura, Ekaterina Bubenshchikova, Rebecca Powell, Yayoi Fukuyo, Tomomi Nakamura, Uyen Tran, Shoji Oda, Minoru Tanaka, Oliver Wessely, Hidetake Kurihara and 2 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Basement membrane defects in CD151-associated glomerular disease.Pediatric nephrology (Berlin, Germany) · 2022
    Article
  5. Article
  6. Review
  7. The human nephrin YThe Journal of biological chemistry · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Novel Microscopic Techniques for Podocyte Research.Frontiers in endocrinology · 2018
    Review
  14. Article
  15. Workshop report: The medaka model for comparative assessment of human disease mechanisms.Comparative biochemistry and physiology. Toxicology & pharmacology : CBP · 2015
    Article
  16. Review
  17. Article
  18. Article
  19. Developmental localization of nephrin in zebrafish and medaka pronephric glomerulus.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2013
    Article
  20. Medaka fish, Oryzias latipes, as a model for human obesity-related glomerulopathy.Biochemical and biophysical research communications · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 2 countries.

Koichiro IchimuraDepartment of Cell Biology, University of Oklahoma Health Science Center, Oklahoma City, Oklahoma, USA.
Ekaterina Bubenshchikova
Rebecca Powell
Yayoi Fukuyo
Tomomi Nakamura
Uyen Tran
Shoji Oda
Minoru Tanaka
Oliver Wessely
Hidetake Kurihara
Tatsuo Sakai
Tomoko Obara
University of Oklahoma Health Sciences Center · USJuntendo University · JPCleveland Clinic · USNational Institute for Basic Biology · JPThe University of Tokyo · JPTokyo University of Science · JP

Funding

UNDERSTANDING THE ROLE OF RETINOL DEHYDROGENASES RDH11 AND RDH12 IN VISIONP20RR017703 · NCRR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI MANDAL, NAWAJES · 2002 to 2011
$23.6M
THE ROLE OF COMPLEX 1 IN MITOCHONDRIAL DYSFUNCTION & FREE RADICAL PROD IN TYPE 1P20RR024215 · NCRR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SHORT, KEVIN R. · 2007 to 2011
$11.7M
CORE--MOLECULAR BIOLOGYP30EY012190 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI ANDERSON, ROBERT E · 1999 to 2009
$5.2M
The Role of Bicaudal-C in Polycystic Kidney DiseaseR01DK080745 · NIDDK · LSU HEALTH SCIENCES CENTER · PI WESSELY, OLIVER · 2009 to 2013
$1.7M
Polycystin2 function in zebrafish and medakaR01DK078209 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI OBARA, TOMOKO · 2007 to 2011
$1.3M
Kidney development and cystogenesis in MedakaR21DK069604 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI OBARA, TOMOKO · 2004 to 2005
$303k
NCRR NIH HHS 1P20RR024215NCRR NIH HHS P20 RR017703NCRR NIH HHS P20 RR024215NEI NIH HHS P30 EY012190NEI NIH HHS P30-EY12190NIDDK NIH HHS 7R01DK080745-03NIDDK NIH HHS R01 DK078209NIDDK NIH HHS R01-DK078209NIDDK NIH HHS R01 DK080745NIDDK NIH HHS R21 DK069604NIDDK NIH HHS R21-DK069604
6 · The paper itself

Abstract

The glomerulus of the vertebrate kidney links the vasculature to the excretory system and produces the primary urine. It is a component of every single nephron in the complex mammalian metanephros and also in the primitive pronephros of fish and amphibian larvae. This systematic work highlights the benefits of using teleost models to understand the pronephric glomerulus development. The morphological processes forming the pronephric glomerulus are astoundingly different between medaka and zebrafish. (1) The glomerular primordium of medaka - unlike the one of zebrafish - exhibits a C-shaped epithelial layer. (2) The C-shaped primordium contains a characteristic balloon-like capillary, which is subsequently divided into several smaller capillaries. (3) In zebrafish, the bilateral pair of pronephric glomeruli is fused at the midline to form a glomerulus, while in medaka the two parts remain unmerged due to the interposition of the interglomerular mesangium. (4) Throughout pronephric development the interglomerular mesangial cells exhibit numerous cytoplasmic granules, which are reminiscent of renin-producing (juxtaglomerular) cells in the mammalian afferent arterioles. Our systematic analysis of medaka and zebrafish demonstrates that in fish, the morphogenesis of the pronephric glomerulus is not stereotypical. These differences need be taken into account in future analyses of medaka mutants with glomerulus defects.

Indexed as

AnimalsCytoplasmic GranulesEmbryo, NonmammalianFish ProteinsGene Expression Regulation, DevelopmentalKidney GlomerulusMiceMorphogenesisOryziasPronephrosRatsReninSpecies SpecificityZebrafishFish ProteinsRenin

Identifiers

PMID23028906
PMCPMC3445478
OpenAlexW2093233747

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.