Evidence map›Paper›PMID 23028816›Full record

ArticlePloS one2012

A conserved motif in the ITK PH-domain is required for phosphoinositide binding and TCR signaling but dispensable for adaptor protein interactions.

Nupura Hirve, Roman M Levytskyy, Stephanie Rigaud, David M Guimond, Tomasz Zal, Karsten Sauer, Constantine D Tsoukas

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Partial defects of T-cell development associated with poor T-cell function.The Journal of allergy and clinical immunology · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Nupura HirveMolecular Biology Institute and Center for Microbial Sciences, Department of Biology, San Diego State University, San Diego, California, USA.
Roman M Levytskyy
Stephanie Rigaud
David M Guimond
Tomasz Zal
Karsten Sauer
Constantine D Tsoukas
San Diego State University · USScripps Research Institute · USThe University of Texas MD Anderson Cancer Center · US

Funding

Inositol-Trisphosphate Kinase B (ItpkB) in T Cell Development and FunctionR01AI070845 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI SAUER, KARSTEN · 2008 to 2012
$3.0M
Immune cell interactions during tumor establishment.R01CA137059 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ZAL, TOMASZ · 2009 to 2013
$1.6M
Mechanisms of Kinase Function and Drug Resistance in CancerR01GM100785 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI CHE, JIANWEI, SAUER, KARSTEN · 2011 to 2014
$1.4M
Integrated Functional Genomics Analysis of Druggable T Cell-Activating GenesR01GM088647 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SAUER, KARSTEN · 2009 to 2010
$760k
Generation of an ITK Biosensor Tool BoxR21AI073636 · NIAID · SAN DIEGO STATE UNIVERSITY · PI TSOUKAS, CONSTANTINE D · 2009 to 2010
$406k
NCI NIH HHS CA137059NCI NIH HHS R01 CA137059NIAID NIH HHS AI070845NIAID NIH HHS AI073636NIAID NIH HHS R01 AI070845NIAID NIH HHS R21 AI073636NIGMS NIH HHS GM088647NIGMS NIH HHS GM100785NIGMS NIH HHS R01 GM088647NIGMS NIH HHS R01 GM100785
6 · The paper itself

Abstract

Binding of the membrane phospholipid phosphatidylinositol 3,4,5-trisphosphate (PIP(3)) to the Pleckstrin Homology (PH) domain of the Tec family protein tyrosine kinase, Inducible T cell Kinase (ITK), is critical for the recruitment of the kinase to the plasma membrane and its co-localization with the TCR-CD3 molecular complex. Three aromatic residues, termed the FYF motif, located in the inner walls of the phospholipid-binding pocket of the ITK PH domain, are conserved in the PH domains of all Tec kinases, but not in other PH-domain containing proteins, suggesting an important function of the FYF motif in the Tec kinase family. However, the biological significance of the FYF amino acid motif in the ITK-PH domain is unknown. To elucidate it, we have tested the effects of a FYF triple mutant (F26S, Y90F, F92S), henceforth termed FYF-ITK mutant, on ITK function. We found that FYF triple mutation inhibits the TCR-induced production of IL-4 by impairing ITK binding to PIP(3), reducing ITK membrane recruitment, inducing conformational changes at the T cell-APC contact site, and compromising phosphorylation of ITK and subsequent phosphorylation of PLCγ(1). Interestingly, however, the FYF motif is dispensable for the interaction of ITK with two of its signaling partners, SLP-76 and LAT. Thus, the FYF mutation uncouples PIP(3)-mediated ITK membrane recruitment from the interactions of the kinase with key components of the TCR signalosome and abrogates ITK function in T cells.

Indexed as

Conserved SequenceSignal TransductionAdaptor Proteins, Signal TransducingAmino Acid MotifsAmino Acid SequenceAnimalsBinding SitesCell NucleusHEK293 CellsHumansInterleukin-4Jurkat CellsMiceMolecular Sequence DataMutant ProteinsPhosphatidylinositol PhosphatesAdaptor Proteins, Signal Transducingemt protein-tyrosine kinaseInterleukin-4Mutant Proteinsphosphatidylinositol 3,4,5-triphosphatePhosphatidylinositol PhosphatesPhospholipase C gammaProtein-Tyrosine KinasesReceptors, Antigen, T-Cell

Identifiers

PMID23028816
PMCPMC3445557
OpenAlexW2094410416

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.