Evidence map›Paper›PMID 23028566›Full record

ArticlePloS one2012

Gene expression and physiological changes of different populations of the long-lived bivalve Arctica islandica under low oxygen conditions.

Eva E R Philipp, Wiebke Wessels, Heike Gruber, Julia Strahl, Anika E Wagner, Insa M A Ernst, Gerald Rimbach, Lars Kraemer, Stefan Schreiber, Doris Abele and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 63 citations in OpenAlex.

  1. Pooled it
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  10. Alternative Animal Models of Aging Research.Frontiers in molecular biosciences · 2021
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  11. Modulated Expression and Activities ofFrontiers in physiology · 2020
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  13. Corbicula fluminea gene expression modulated by CeOEnvironmental science and pollution research international · 2019
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  14. Cytogenetics inGenes · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Eva E R PhilippCellbiology, Institute of Clinical Molecular Biology, Christian-Albrechts University Kiel, Kiel, Germany. e.philipp@ikmb.uni-kiel.de
Wiebke Wessels
Heike Gruber
Julia Strahl
Anika E Wagner
Insa M A Ernst
Gerald Rimbach
Lars Kraemer
Stefan Schreiber
Doris Abele
Philip Rosenstiel
Kiel University · DEAlfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The bivalve Arctica islandica is extremely long lived (>400 years) and can tolerate long periods of hypoxia and anoxia. European populations differ in maximum life spans (MLSP) from 40 years in the Baltic to >400 years around Iceland. Characteristic behavior of A. islandica involves phases of metabolic rate depression (MRD) during which the animals burry into the sediment for several days. During these phases the shell water oxygen concentrations reaches hypoxic to anoxic levels, which possibly support the long life span of some populations. We investigated gene regulation in A. islandica from a long-lived (MLSP 150 years) German Bight population and the short-lived Baltic Sea population, experimentally exposed to different oxygen levels. A new A. islandica transcriptome enabled the identification of genes important during hypoxia/anoxia events and, more generally, gene mining for putative stress response and (anti-) aging genes. Expression changes of a) antioxidant defense: Catalase, Glutathione peroxidase, manganese and copper-zinc Superoxide dismutase; b) oxygen sensing and general stress response: Hypoxia inducible factor alpha, Prolyl hydroxylase and Heat-shock protein 70; and c) anaerobic capacity: Malate dehydrogenase and Octopine dehydrogenase, related transcripts were investigated. Exposed to low oxygen, German Bight individuals suppressed transcription of all investigated genes, whereas Baltic Sea bivalves enhanced gene transcription under anoxic incubation (0 kPa) and, further, decreased these transcription levels again during 6 h of re-oxygenation. Hypoxic and anoxic exposure and subsequent re-oxygenation in Baltic Sea animals did not lead to increased protein oxidation or induction of apoptosis, emphasizing considerable hypoxia/re-oxygenation tolerance in this species. The data suggest that the energy saving effect of MRD may not be an attribute of Baltic Sea A. islandica chronically exposed to high environmental variability (oxygenation, temperature, salinity). Contrary, higher physiological flexibility and stress hardening may predispose these animals to perform a pronounced stress response at the expense of life span.

Indexed as

Amino Acid OxidoreductasesAnimalsAntioxidantsBivalviaCatalaseContig MappingExpressed Sequence TagsGene Expression RegulationGlutathioneHypoxiaLongevityMalate DehydrogenaseOxygenAmino Acid OxidoreductasesAntioxidantsCatalaseD-octopine dehydrogenaseGlutathioneMalate DehydrogenaseOxygen

Identifiers

PMID23028566
PMCPMC3446923
OpenAlexW2070327989

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.