Evidence map›Paper›PMID 23028052›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2012

Endoplasmic reticulum stress regulates the innate immunity critical transcription factor IRF3.

Yi-Ping Liu, Ling Zeng, Austin Tian, Ashley Bomkamp, Daniel Rivera, Delia Gutman, Glen N Barber, Julie K Olson, Judith A Smith

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 149 citations in OpenAlex.

  1. Review
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  6. Article
  7. Vamp3/syntaxin 4 mediates the basolateral membrane fusion of TfR transcytosis across the BBB and is exploited by pathogenicProceedings of the National Academy of Sciences of the United States of America · 2025
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  8. Article
  9. Review
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  19. Review
  20. Type I IFN signaling in the absence of IRGM1 promotesbioRxiv : the preprint server for biology · 2023
    Article

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Yi-Ping LiuDepartment of Pediatrics, School of Medicine and Public Health, University of Wisconsin, Madison, WI 53792, USA.
Ling Zeng
Austin Tian
Ashley Bomkamp
Daniel Rivera
Delia Gutman
Glen N Barber
Julie K Olson
Judith A Smith
University of Wisconsin–Madison · USNeurological Surgery · USSylvester Comprehensive Cancer Center · USUniversity of Miami · US

Funding

Regulation of IFN-beta induction by P2X7 purinergic receptor signalingK08AI081045 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI SMITH, JUDITH ANNE · 2009 to 2011
$419k
NIAID NIH HHS K08 AI081045
6 · The paper itself

Abstract

IFN regulatory factor 3 (IRF3) regulates early type I IFNs and other genes involved in innate immunity. We have previously shown that cells undergoing an endoplasmic reticulum (ER) stress response called the unfolded protein response produce synergistically augmented IFN-β when stimulated with pattern recognition receptor agonists such as LPS. Concomitant ER stress and LPS stimulation resulted in greater recruitment of the IRF3 transcription factor to ifnb1 gene regulatory elements. In this study, we used murine cells to demonstrate that both oxygen-glucose deprivation and pharmacologic unfolded protein response inducers trigger phosphorylation and nuclear translocation of IRF3, even in the absence of exogenous LPS. Different ER stressors used distinct mechanisms to activate IRF3: IRF3 phosphorylation due to calcium-mobilizing ER stress (thapsigargin treatment, oxygen-glucose deprivation) critically depended upon stimulator of IFN gene, an ER-resident nucleic acid-responsive molecule. However, calcium mobilization alone by ionomycin was insufficient for IRF3 phosphorylation. In contrast, other forms of ER stress (e.g., tunicamycin treatment) promote IRF3 phosphorylation independently of stimulator of IFN gene and TANK-binding kinase 1. Rather, IRF3 activation by tunicamycin and 2-deoxyglucose was inhibited by 4-(2-aminoethyl)-benzenesulfonyl fluoride hydrochloride, a serine protease inhibitor that blocks activating transcription factor 6 processing. Interfering with ER stress-induced IRF3 activation abrogated IFN-β synergy. Together, these data suggest ER stress primes cells to respond to innate immune stimuli by activating the IRF3 transcription factor. Our results also suggest certain types of ER stress accomplish IRF3 phosphorylation by co-opting existing innate immune pathogen response pathways. These data have implications for diseases involving ER stress and type I IFN.

Indexed as

Immunity, InnateActive Transport, Cell NucleusAnimalsCalcium SignalingCell LineEndoplasmic Reticulum StressInterferon Regulatory Factor-3LactonesLipopolysaccharidesMembrane ProteinsMiceMice, Inbred C57BLMice, KnockoutPhosphorylationProtein Serine-Threonine KinasesSesquiterpenesInterferon Regulatory Factor-3Irf3 protein, mouseLactonesLipopolysaccharidesMembrane ProteinsProtein Serine-Threonine KinasesSesquiterpenesSting1 protein, mouseSTING ProteinTbk1 protein, mousethapsigargicin

Identifiers

PMID23028052
PMCPMC3478468
OpenAlexW2143999240

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.