Evidence map›Paper›PMID 23024791›Full record

ArticlePloS one2012

Prenatal exposure to TCDD triggers significant modulation of microRNA expression profile in the thymus that affects consequent gene expression.

Narendra P Singh, Udai P Singh, Hongbing Guan, Prakash Nagarkatti, Mitzi Nagarkatti

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
8.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 69 citations in OpenAlex.

  1. Pooled it
  2. Guardians under Siege: Exploring Pollution's Effects on Human Immunity.International journal of molecular sciences · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. 2,3,7,8-Tetrachlorodibenzo-BioMed research international · 2020
    Article
  13. Article
  14. Article
  15. Multigenerational and Transgenerational Effects of Dioxins.International journal of molecular sciences · 2019
    Review
  16. Article
  17. Environmental and occupational determinants of lung cancer.Translational lung cancer research · 2019
    Review
  18. MicroRNAs and their role in environmental chemical carcinogenesis.Environmental geochemistry and health · 2019
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Narendra P SinghDepartment of Pathology, Microbiology & Immunology, University of South Carolina School of Medicine, Columbia, South Carolina, United States of America.
Udai P Singh
Hongbing Guan
Prakash Nagarkatti
Mitzi Nagarkatti
University of South Carolina · US

Funding

Use of Resveratrol to treat experimental multiple sclerosisP01AT003961 · NCCIH · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI NAGARKATTI, PRAKASH S · 2007 to 2018
$14.2M
TCDD-INDUCED APOPTOSIS EFFECT ON T CELLSR01ES009098 · NIEHS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI NAGARKATTI, PRAKASH S · 1999 to 2008
$2.2M
Role of natural indoles in experimental autoimmune encephalomyelitisR01AT006888 · NCCIH · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI NAGARKATTI, MITZI · 2011 to 2015
$2.0M
Immunopathological basis of PTSDR01MH094755 · NIMH · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI NAGARKATTI, PRAKASH S · 2011 to 2015
$1.7M
Estrogen-T cell InteractionsR01ES019313 · NIEHS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI NAGARKATTI, MITZI, NAGARKATTI, PRAKASH S · 2010 to 2014
$1.5M
BLRD VA I01 BX001357NCCIH NIH HHS P01 AT003961NCCIH NIH HHS P01AT003961NCCIH NIH HHS R01 AT006888NCCIH NIH HHS R01AT006888NIEHS NIH HHS R01 ES009098NIEHS NIH HHS R01 ES019313NIEHS NIH HHS R01ES019313NIEHS NIH HHS R01 ES09098NIMH NIH HHS R01 MH094755NIMH NIH HHS R01MH094755
6 · The paper itself

Abstract

backgroundMicroRNAs (miRs) are a class of small RNAs that regulate gene expression. There are over 700 miRs encoded in the mouse genome and modulate most of the cellular pathways and functions by controlling gene expression. However, there is not much known about the pathophysiological role of miRs. TCDD (2,3,7,8-tetrachlorodibenzo-p-dioxin), an environmental contaminant is well known to induce severe toxicity (acute and chronic) with long-term effects. Also, in utero exposure of fetus to TCDD has been shown to cause thymic atrophy and alterations in T cell differentiation. It is also relevant to understand "the fetal basis of adult disease" hypothesis, which proposes that prenatal exposure to certain forms of nutritional and environmental stress can cause increased susceptibility to clinical disorders later in life. In the current study, therefore, we investigated the effects of prenatal exposure to TCDD on miR profile in fetal thymocytes and searched for their possible role in causing thymic atrophy and alterations in the expression of apoptotic genes. METHODOLOGY/PRINCIPAL

findingsmiR arrays of fetal thymocytes post exposure to TCDD and vehicle were performed. Of the 608 mouse miRs screened, 78 miRs were altered more than 1.5 fold and 28 miRs were changed more than 2 fold in fetal thymocytes post-TCDD exposure when compared to vehicle controls. We validated the expression of several of the miRs using RT-PCR. Furthermore, several of the miRs that were downregulated contained highly complementary sequence to the 3'-UTR region of AhR, CYP1A1, Fas and FasL. Also, the Ingenuity Pathway Analysis software and database was used to analyze the 78 miRs that exhibited significant expression changes and revealed that as many as 15 pathways may be affected. CONCLUSIONS/SIGNIFICANCE: These studies revealed that TCDD-mediated alterations in miR expression may be involved in the regulation of its toxicity including cancer, hepatic injury, apoptosis, and cellular development.

Indexed as

Gene Expression ProfilingMaternal ExposureAnimalsApoptosisCluster AnalysisCytochrome P-450 CYP1A1Fas Ligand Proteinfas ReceptorFemaleGene Expression Regulation, DevelopmentalGene Regulatory NetworksMiceMicroRNAsNeoplasmsPolychlorinated DibenzodioxinsPregnancyCytochrome P-450 CYP1A1Fas Ligand Proteinfas ReceptorMicroRNAsmirnlet7 microRNA, mousePolychlorinated DibenzodioxinsReceptors, Aryl Hydrocarbon

Identifiers

PMID23024791
PMCPMC3443208
OpenAlexW2017790388

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.