Evidence map›Paper›PMID 23024344›Full record

ArticleJournal of bacteriology2012

Two transporters essential for reassimilation of novel cholate metabolites by Rhodococcus jostii RHA1.

Kendra Swain, Israël Casabon, Lindsay D Eltis, William W Mohn

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Degradation of CCurrent microbiology · 2025
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  3. Insight into Different Stages of Steroid Degradation in ThermophilicInternational journal of molecular sciences · 2022
    Article
  4. The unusual convergence of steroid catabolic pathways inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Article
  6. Comparative Analysis of Bile-Salt Degradation inApplied and environmental microbiology · 2021
    Article
  7. Article
  8. Article
  9. Review
  10. Substrate Inhibition of 5β-ΔFrontiers in microbiology · 2021
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
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  17. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kendra SwainDepartment of Microbiology and Immunology, University of British Columbia, Life Sciences Institute, Vancouver, British Columbia, Canada.
Israël Casabon
Lindsay D Eltis
William W Mohn
University of British Columbia · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

The bacterial uptake of steroids and their metabolites remains poorly understood. We investigated two transporters associated with cholate catabolism in Rhodococcus jostii RHA1. Reverse transcriptase quantitative-PCR indicated that an ATP-binding cassette (ABC) transporter and a major facilitator superfamily (MFS) transporter were upregulated 16.7- and 174-fold, respectively, during the exponential phase of growth on cholate compared to growth on pyruvate. Gene knockout analysis established that these transporters are required for the reassimilation of distinct metabolites that accumulate during growth on cholate. The ABC transporter, encoded by camABCD, was essential for uptake of 1β(2'-propanoate)-3aα-H-4α(3"(R)-hydroxy-3"-propanoate)-7aβ-methylhexahydro-5-indanone and a desaturated analog. The MFS transporter, encoded by camM, was essential for uptake of 3,7(R),12(S)-trihydroxy-9-oxo-9,10-seco-23,24-bisnorchola-1,3,5(10)-trien-22-oate. These metabolites differ from cholate metabolites reported to be excreted by proteobacteria in that they retain an isopropanoyl side chain at C-17. The uptake of these metabolites was necessary for maximal growth on cholate: a ΔcamB mutant lacking the permease component of the ABC transporter and a ΔcamM mutant lacking the MFS transporter grew to 74% and 77%, respectively, of the yield of the wild type. This study demonstrates for the first time the requirement for specific transporters for uptake of cholate metabolites and highlights the importance and complexity of transport processes associated with bacterial steroid catabolism.

Indexed as

ATP-Binding Cassette TransportersBiological TransportCholatesGenes, BacterialMembrane Transport ProteinsMutationOperonPyruvic AcidReverse Transcriptase Polymerase Chain ReactionRhodococcusSoil MicrobiologyUp-RegulationATP-Binding Cassette TransportersCholatesMembrane Transport ProteinsPyruvic Acid

Identifiers

PMID23024344
PMCPMC3510610
OpenAlexW2109749350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.