Evidence map›Paper›PMID 23023776›Full record

ArticleArthritis and rheumatism2012

European genetic ancestry is associated with a decreased risk of lupus nephritis.

Ilana B Richman, Kimberly E Taylor, Sharon A Chung, Laura Trupin, Michelle Petri, Edward Yelin, Robert R Graham, Annette Lee, Timothy W Behrens, Peter K Gregersen and 2 more

Open access · greenAbstract read
In one paragraph

Article in Arthritis and rheumatism, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Review
  5. Article
  6. Article
  7. Lupus · 2023
    Article
  8. Article
  9. Transcriptome Studies in Lupus Nephritis.Archivum immunologiae et therapiae experimentalis · 2022
    Review
  10. Article
  11. Article
  12. Multiethnic Investigation of Risk and Immune Determinants of COVID-19 Outcomes.Frontiers in cellular and infection microbiology · 2022
    Article
  13. Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Ilana B RichmanStanford University, Stanford, California, USA.
Kimberly E Taylor
Sharon A Chung
Laura Trupin
Michelle Petri
Edward Yelin
Robert R Graham
Annette Lee
Timothy W Behrens
Peter K Gregersen
Michael F Seldin
Lindsey A Criswell
University of California, San Francisco · USNorthwell Health · USJohns Hopkins University · USStanford University · USUniversity of California, Davis · US

Funding

ZD1839 FOR MALIGNANT ASTROCYTOMA OR GLIOBLASTOMA AND MENINGIOMAM01RR000079 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KESSLER, DAVID A · 1985 to 2006
$26.0M
CTSA: K12 COMPONENTKL2RR024130 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOHNSTON, S. CLAIBORNE · 2006 to 2011
$19.3M
The Interplay of Sociodemographic and Genetic Factors in SLE Health DisparitiesP60AR053308 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KATZ, PATRICIA P · 2006 to 2016
$11.8M
Lupus CohortR01AR043727 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI PETRI, MICHELLE A · 1997 to 2015
$8.2M
TESTING SLE CANDIDATE LOCI USING CASES AND THEIR PARENTSR01AR044804 · NIAMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI CRISWELL, LINDSEY ANN · 1999 to 2003
$1.1M
The Genetic Epidemiology of RA and SLEK24AR002175 · NIAMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI CRISWELL, LINDSEY ANN · 2001 to 2005
$555k
HOPKINS LUPUS COHORTR55AR043727 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI PETRI, MICHELLE A · 1996 to 1996
–
NCRR NIH HHS KL2 RR024130NCRR NIH HHS M01 RR000079NCRR NIH HHS M01-RR-0079NCRR NIH HHS RR-024130NIAMS NIH HHS AR-43727NIAMS NIH HHS K24 AR002175NIAMS NIH HHS K24-AR-0217NIAMS NIH HHS P60 AR053308NIAMS NIH HHS P60-AR-053308NIAMS NIH HHS R01 AR043727NIAMS NIH HHS R01 AR044804NIAMS NIH HHS R01-AR-44804
6 · The paper itself

Abstract

objectiveAfrican Americans, East Asians, and Hispanics with systemic lupus erythematosus (SLE) are more likely to develop renal disease than are SLE patients of European descent. This study was undertaken to investigate whether European genetic ancestry protects against the development of lupus nephritis, with the aim of exploring the genetic and socioeconomic factors that might explain this effect.

methodsThis was a cross-sectional study of SLE patients from a multiethnic case collection. Participants were genotyped for 126 single-nucleotide polymorphisms (SNPs) informative for ancestry. A subset of participants was also genotyped for 80 SNPs in 14 candidate genes for renal disease in SLE. Logistic regression was used to test the association between European ancestry and renal disease. Analyses were adjusted for continental ancestries, socioeconomic status (SES), and candidate genes.

resultsParticipants (n = 1,906) had, on average, 62.4% European, 15.8% African, 11.5% East Asian, 6.5% Amerindian, and 3.8% South Asian ancestry. Among the participants, 656 (34%) had renal disease. A 10% increase in the proportion of European ancestry estimated in each participant was associated with a 15% reduction in the odds of having renal disease, after adjustment for disease duration and sex (odds ratio 0.85, 95% confidence interval 0.82-0.87; P = 1.9 × 10(-30) ). Adjustment for other genetic ancestries, measures of SES, or SNPs in the genes most associated with renal disease (IRF5 [rs4728142], BLK [rs2736340], STAT4 [rs3024912], and HLA-DRB1*0301 and DRB1*1501) did not substantively alter this relationship.

conclusionEuropean ancestry is protective against the development of renal disease in SLE, an effect that is independent of other genetic ancestries, candidate risk alleles, and socioeconomic factors.

Indexed as

Genetic Predisposition to DiseaseGenotypeAdultAllelesAsian PeopleBlack or African AmericanBlack PeopleCross-Sectional StudiesFemaleHLA AntigensHumansLupus NephritisMaleMiddle AgedPolymorphism, Single NucleotideRiskHLA Antigens

Identifiers

PMID23023776
PMCPMC3865923
OpenAlexW2021657063

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.