Evidence map›Paper›PMID 23021708›Full record

Trial reportInternational journal of radiation oncology, biology, physics2013

A 2-stage genome-wide association study to identify single nucleotide polymorphisms associated with development of erectile dysfunction following radiation therapy for prostate cancer.

Sarah L Kerns, Richard Stock, Nelson Stone, Michael Buckstein, Yongzhao Shao, Christopher Campbell, Lynda Rath, Dirk De Ruysscher, Guido Lammering, Rosetta Hixson and 4 more

Open access · greenAbstract readRandomized Controlled Trial
In one paragraph

Trial report in International journal of radiation oncology, biology, physics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 5 pooled it
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 5 syntheses or guidelines pooled it, 66 citations in OpenAlex.

  1. Pooled it
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  4. Pooled it
  5. Pooled it
  6. Trial
  7. Review
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  11. Article
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  14. Article
  15. Observational
  16. A Review of Prostate Cancer Genome-Wide Association Studies (GWAS).Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2018
    Review
  17. Review
  18. Radiogenomics and radiotherapy response modeling.Physics in medicine and biology · 2017
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Sarah L KernsDepartment of Radiation Oncology, Mount Sinai School of Medicine, New York, New York 10029, USA.
Richard Stock
Nelson Stone
Michael Buckstein
Yongzhao Shao
Christopher Campbell
Lynda Rath
Dirk De Ruysscher
Guido Lammering
Rosetta Hixson
Jamie Cesaretti
Mitchell Terk
Harry Ostrer
Barry S Rosenstein
Icahn School of Medicine at Mount Sinai · USAlbert Einstein College of Medicine · USMaastricht University · NLNew York University · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
Genome-Wide Study to Identify SNPs and CNPs Associated with Radiation InjuryR01CA134444 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI OSTRER, HARRY, ROSENSTEIN, BARRY S · 2009 to 2012
$2.3M
NCI NIH HHS 1R01CA134444NCI NIH HHS P30 CA016087NCI NIH HHS R01 CA134444
6 · The paper itself

Abstract

purposeTo identify single nucleotide polymorphisms (SNPs) associated with development of erectile dysfunction (ED) among prostate cancer patients treated with radiation therapy. METHODS AND MATERIALS: A 2-stage genome-wide association study was performed. Patients were split randomly into a stage I discovery cohort (132 cases, 103 controls) and a stage II replication cohort (128 cases, 102 controls). The discovery cohort was genotyped using Affymetrix 6.0 genome-wide arrays. The 940 top ranking SNPs selected from the discovery cohort were genotyped in the replication cohort using Illumina iSelect custom SNP arrays.

resultsTwelve SNPs identified in the discovery cohort and validated in the replication cohort were associated with development of ED following radiation therapy (Fisher combined P values 2.1×10(-5) to 6.2×10(-4)). Notably, these 12 SNPs lie in or near genes involved in erectile function or other normal cellular functions (adhesion and signaling) rather than DNA damage repair. In a multivariable model including nongenetic risk factors, the odds ratios for these SNPs ranged from 1.6 to 5.6 in the pooled cohort. There was a striking relationship between the cumulative number of SNP risk alleles an individual possessed and ED status (Sommers' D P value=1.7×10(-29)). A 1-allele increase in cumulative SNP score increased the odds for developing ED by a factor of 2.2 (P value=2.1×10(-19)). The cumulative SNP score model had a sensitivity of 84% and specificity of 75% for prediction of developing ED at the radiation therapy planning stage.

conclusionsThis genome-wide association study identified a set of SNPs that are associated with development of ED following radiation therapy. These candidate genetic predictors warrant more definitive validation in an independent cohort.

Indexed as

AgedAge FactorsBrachytherapyErectile DysfunctionGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansIodine RadioisotopesMaleMiddle AgedPalladiumPolymorphism, Single NucleotideProspective StudiesProstatic NeoplasmsRadioisotopesRadiotherapy, ConformalIodine RadioisotopesPalladiumRadioisotopes

Identifiers

PMID23021708
PMCPMC3616619
OpenAlexW2021061760

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.