Evidence map›Paper›PMID 23009887›Full record

ArticleGene2012

Impact of cytokine and cytokine receptor gene polymorphisms on cellular immunity after smallpox vaccination.

Inna G Ovsyannikova, Iana H Haralambieva, Richard B Kennedy, V Shane Pankratz, Robert A Vierkant, Robert M Jacobson, Gregory A Poland

Abstract read
In one paragraph

Article in Gene, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Defending against smallpox: a focus on vaccines.Expert review of vaccines · 2016
    Review
  11. Article
  12. Review
  13. Changing face of vaccination in immunocompromised hosts.Current infectious disease reports · 2014
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Inna G OvsyannikovaMayo Clinic Vaccine Research Group, Mayo Clinic, Rochester, MN 55905, USA.
Iana H Haralambieva
Richard B Kennedy
V Shane Pankratz
Robert A Vierkant
Robert M Jacobson
Gregory A Poland
Mayo Clinic in Florida · USMayo Clinic in Arizona · US

Funding

NIAID NIH HHS AI40065NIAID NIH HHS N01 AI040065
6 · The paper itself

Abstract

We explored associations between SNPs in cytokine/cytokine receptor genes and cellular immunity in subjects following primary smallpox vaccination. We also analyzed the genotype-phenotype associations discovered in the Caucasian subjects among a cohort of African-Americans. In Caucasians we found 277 associations (p<0.05) between gene SNPs and inter-individual variations in IFN-α, IL-12p40, IL-1β, IL-2, and TNF-α secretion levels. A collection of SNPs in the IL1RN, IL2RB, IL4R, IL6, IL10RB, IL12A, and IL12RB2 genes had consistent associations among both Caucasians and African-Americans. A regulatory SNP (rs452204) in the IL1RN gene was significantly associated with higher levels of IL-2 secretion in an allele dose-dependent manner in both race groups (p=0.05 for Caucasians and p=0.002 for African-Americans). IL12RB2 polymorphism rs3790567 was associated with a dose-related decrease in IL-1β secretion (p=0.009 for Caucasians and p=0.01 for African-Americans). Our results demonstrate that variations in smallpox vaccine-induced cytokine responses are modulated by genetic polymorphisms in cytokine and cytokine receptor genes.

Indexed as

Immunity, CellularPolymorphism, Single NucleotideAdultBlack or African AmericanCytokinesEnzyme-Linked Immunosorbent AssayFemaleGene FrequencyGenotypeHumansInterleukin-1betaInterleukin 1 Receptor Antagonist ProteinInterleukin-2MaleReceptors, CytokineReceptors, Interleukin-12CytokinesIL12RB2 protein, humanIL1RN protein, humanInterleukin-1betaInterleukin 1 Receptor Antagonist ProteinInterleukin-2Receptors, CytokineReceptors, Interleukin-12Smallpox Vaccine

Identifiers

PMID23009887
PMCPMC3463724
OpenAlexW2030022212

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.