Evidence map›Paper›PMID 23009227›Full record

ArticleAlimentary pharmacology & therapeutics2012

The effects of varying acidity on Helicobacter pylori growth and the bactericidal efficacy of ampicillin.

E A Marcus, N Inatomi, G T Nagami, G Sachs, D R Scott

Open access · bronzeAbstract read
In one paragraph

Article in Alimentary pharmacology & therapeutics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 103 citations in OpenAlex.

  1. Efficacy of second-line regimens forBMJ open gastroenterology · 2020
    Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Trial
  6. Article
  7. Article
  8. Vonoprazan in Helicobacter pylori treatment regimens in India: Dawn of a New Era.Indian journal of gastroenterology : official journal of the Indian Society of Gastroenterology · 2025
    Article
  9. Article
  10. Nanomaterials: A Prospective Strategy for Biofilm-FormingInternational journal of nanomedicine · 2025
    Review
  11. Article
  12. World journal of clinical cases · 2024
    Article
  13. Review
  14. Review
  15. GERD: Latest update on acid-suppressant drugs.Current research in pharmacology and drug discovery · 2024
    Article
  16. Biofilm ofAntibiotics (Basel, Switzerland) · 2023
    Review
  17. Review
  18. Intraluminal Therapy forBiomedicines · 2023
    Article
  19. Article
  20. Implications of the paradigm shift in management ofTherapeutic advances in gastroenterology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

E A MarcusDepartment of Pediatrics, David Geffen School of Medicine at UCLA, Los Angeles, CA 90073, USA.
N Inatomi
G T Nagami
G Sachs
D R Scott
University of California, Los Angeles · USVA West Los Angeles Medical Center · USTakeda (Japan) · JP

Funding

Pilot and Feasibility ProgramP30DK041301 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KASAHARA, NORIYUKI · 1990 to 2019
$18.0M
UCLA Child Health Research Career Development AwardK12HD034610 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DEVASKAR, SHERIN U · 2002 to 2017
$6.6M
The Gastric Biology of Helicobacter PyloriR01DK053642 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SACHS, GEORGE · 1997 to 2012
$3.2M
Acid Adaptation Targets for Eradication of Helicobacter pyloriI01BX001006 · VA · VA GREATER LOS ANGELES HEALTHCARE SYSTEM · PI SACHS, GEORGE · 2011 to 2018
–
SIMIAN RETROVIRUSES--NOVEL GENE DELIVERY VECTORSR21DK053462 · NIDDK · OREGON REGIONAL PRIMATE RESEARCH CENTER · PI MACHIDA, CURTIS A · 1998 to 1999
–
BLRD VA 1I01BX001006BLRD VA I01 BX001006NICHD NIH HHS K12 HD034610NIDDK NIH HHS DK053462NIDDK NIH HHS P30 DK041301NIDDK NIH HHS P30 DK41301NIDDK NIH HHS R01 DK053642
6 · The paper itself

Abstract

backgroundPenicillins inhibit cell wall synthesis; therefore, Helicobacter pylori must be dividing for this class of antibiotics to be effective in eradication therapy. Identifying growth responses to varying medium pH may allow design of more effective treatment regimens.

aimTo determine the effects of acidity on bacterial growth and the bactericidal efficacy of ampicillin.

methodsH. pylori were incubated in dialysis chambers suspended in 1.5-L of media at various pHs with 5 mM urea, with or without ampicillin, for 4, 8 or 16 h, thus mimicking unbuffered gastric juice. Changes in gene expression, viability and survival were determined.

resultsAt pH 3.0, but not at pH 4.5 or 7.4, there was decreased expression of ~400 genes, including many cell envelope biosynthesis, cell division and penicillin-binding protein genes. Ampicillin was bactericidal at pH 4.5 and 7.4, but not at pH 3.0.

conclusionsAmpicillin is bactericidal at pH 4.5 and 7.4, but not at pH 3.0, due to decreased expression of cell envelope and division genes with loss of cell division at pH 3.0. Therefore, at pH 3.0, the likely pH at the gastric surface, the bacteria are nondividing and persist with ampicillin treatment. A more effective inhibitor of acid secretion that maintains gastric pH near neutrality for 24 h/day should enhance the efficacy of amoxicillin, improving triple therapy and likely even allowing dual amoxicillin-based therapy for H. pylori eradication.

Indexed as

AmpicillinAnti-Bacterial AgentsGastric JuiceHelicobacter pyloriHumansHydrogen-Ion ConcentrationPolymerase Chain ReactionUreaAmpicillinAnti-Bacterial AgentsUrea

Identifiers

PMID23009227
PMCPMC3474890
OpenAlexW2031857127

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.