Evidence map›Paper›PMID 23007392›Full record

ArticleThe Journal of biological chemistry2012

Characterization of a Phanerochaete chrysosporium glutathione transferase reveals a novel structural and functional class with ligandin properties.

Yann Mathieu, Pascalita Prosper, Marc Buée, Stéphane Dumarçay, Frédérique Favier, Eric Gelhaye, Philippe Gérardin, Luc Harvengt, Jean-Pierre Jacquot, Tiphaine Lamant and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. The Effect of Broccoli Glucosinolates Hydrolysis Products onInternational journal of molecular sciences · 2024
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  4. Review
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  6. Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus.DNA research : an international journal for rapid publication of reports on genes and genomes · 2020
    Article
  7. Article
  8. Article
  9. A heterodimeric glutathioneThe Journal of biological chemistry · 2019
    Article
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  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Yann MathieuUniversité de Lorraine, Interactions Arbre-Microorganismes, UMR 1136, Institut Fédératif de Recherche 110 EFABA, Vandoeuvre-lès-Nancy F-54506, France.
Pascalita Prosper
Marc Buée
Stéphane Dumarçay
Frédérique Favier
Eric Gelhaye
Philippe Gérardin
Luc Harvengt
Jean-Pierre Jacquot
Tiphaine Lamant
Edgar Meux
Sandrine Mathiot
Claude Didierjean
Mélanie Morel
Interactions Arbres-Microorganismes · FRCentre National de la Recherche Scientifique · FRInstitut Technologique Forêt Cellulose Bois-Construction Ameublement · FRUniversité de Lorraine · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutathione S-transferases (GSTs) form a superfamily of multifunctional proteins with essential roles in cellular detoxification processes. A new fungal specific class of GST has been highlighted by genomic approaches. The biochemical and structural characterization of one isoform of this class in Phanerochaete chrysosporium revealed original properties. The three-dimensional structure showed a new dimerization mode and specific features by comparison with the canonical GST structure. An additional β-hairpin motif in the N-terminal domain prevents the formation of the regular GST dimer and acts as a lid, which closes upon glutathione binding. Moreover, this isoform is the first described GST that contains all secondary structural elements, including helix α4' in the C-terminal domain, of the presumed common ancestor of cytosolic GSTs (i.e. glutaredoxin 2). A sulfate binding site has been identified close to the glutathione binding site and allows the binding of 8-anilino-1-naphtalene sulfonic acid. Competition experiments between 8-anilino-1-naphtalene sulfonic acid, which has fluorescent properties, and various molecules showed that this GST binds glutathionylated and sulfated compounds but also wood extractive molecules, such as vanillin, chloronitrobenzoic acid, hydroxyacetophenone, catechins, and aldehydes, in the glutathione pocket. This enzyme could thus function as a classical GST through the addition of glutathione mainly to phenethyl isothiocyanate, but alternatively and in a competitive way, it could also act as a ligandin of wood extractive compounds. These new structural and functional properties lead us to propose that this GST belongs to a new class that we name GSTFuA, for fungal specific GST class A.

Indexed as

Anilino NaphthalenesulfonatesBinding, CompetitiveBinding SitesBiotechnologyCloning, MolecularCrystallography, X-RayGlutathioneGlutathione TransferaseLigninMass SpectrometryMolecular Sequence DataPhanerochaeteProtein BindingProtein ConformationProtein IsoformsRecombinant Proteins8-anilino-1-naphthalenesulfonic acidAnilino NaphthalenesulfonatesGlutathioneGlutathione TransferaseLigninProtein IsoformsRecombinant Proteins

Identifiers

PMID23007392
PMCPMC3493941
OpenAlexW2035694509

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.