Evidence map›Paper›PMID 23006956›Full record

ArticleJournal of veterinary science2012

Frequency of group A rotavirus with mixed G and P genotypes in bovines: predominance of G3 genotype and its emergence in combination with G8/G10 types.

Yashpal S Malik, Kuldeep Sharma, Nirupama Vaid, Somendu Chakravarti, K M Chandrashekar, Sanjay S Basera, Rashmi Singh, Minakshi, Gaya Prasad, Baldev R Gulati and 2 more

Open access · goldAbstract read
In one paragraph

Article in Journal of veterinary science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 52 citations in OpenAlex.

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  6. Structural basis of P[II] rotavirus evolution and host ranges under selection of histo-blood group antigens.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Yashpal S MalikDivision of Virology, Indian Veterinary Research Institute, Campus Mukteswar 263138, Uttarakhand, India. malikyps@yahoo.com
Kuldeep Sharma
Nirupama Vaid
Somendu Chakravarti
K M Chandrashekar
Sanjay S Basera
Rashmi Singh
Minakshi
Gaya Prasad
Baldev R Gulati
Kiren N Bhilegaonkar
Awadh B Pandey
Indian Veterinary Research Institute · INChaudhary Charan Singh Haryana Agricultural University · INGovind Ballabh Pant University of Agriculture and Technology · INJawaharlal Nehru Krishi Vishwa Vidyalaya · INNational Research Centre on Equines · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study describes the genotypic distribution of rotaviruses (RVs) in an Indian bovine population with unexpectedly higher proportions of G3 alone or in combination of G8/G10. PCR-genotyping confirmed that 39.4% (13/33) of the prevalent RVs were the G3 type while 60.6% (20/33) were dual G3G10 or G3G8 types. P typing revealed that 93.9% (31/33) of the samples were P[11] while 6.1% (2/33) possessed a dual P[1]P[11] type. Sequence analysis of the VP7 gene from G3 strains viz. B-46, 0970, and BR-133 showed that these strains had sequence identities of 90.5% to 100% with other bovine G3 strains. The highest identity (98.9% to 100%) was observed with RUBV3 bovine G3 strains from eastern India. The G3 strains (B-46, 0970, and BR-133) showed 97.5% to 98.8% sequence homologies with the Indian equine RV strain Erv-80. Phylogenetic analysis demonstrated that G3 strains clustered with bovine RUBV3 and J-63, and equine Erv-80 G3. Overall, these results confirmed that the incidence of infection by RVs with the G3 genotype and mixed genotypes in the bovine population was higher than previously predicted. This finding reinforces the importance of constantly monitoring circulating viral strains with the G3 genotype in future surveillance studies.

Indexed as

AnimalsCattleCattle DiseasesDesert ClimateFecesGenotypeIndiaMolecular Sequence DataPhylogenyReverse Transcriptase Polymerase Chain ReactionRNA, ViralRotavirusRotavirus InfectionsSequence Analysis, ProteinSequence Analysis, RNASequence HomologyRNA, Viral

Identifiers

PMID23006956
PMCPMC3467402
OpenAlexW1995781769

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.