Evidence map›Paper›PMID 23001662›Full record

ArticleApplied and environmental microbiology2012

Characterizing Pneumocystis in the lungs of bats: understanding Pneumocystis evolution and the spread of Pneumocystis organisms in mammal populations.

Haroon Akbar, Claire Pinçon, Cecile-Marie Aliouat-Denis, Sandra Derouiche, Maria-Lucia Taylor, Muriel Pottier, Laura-Helena Carreto-Binaghi, Antonio E González-González, Aurore Courpon, Véronique Barriel and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Three distinct forms of Pneumocystis coexist in individuals of two species of deer mice (genus Peromyscus).Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2025
    Article
  4. Review
  5. Meta-Analysis and Systematic Literature Review of the GenusJournal of fungi (Basel, Switzerland) · 2023
    Article
  6. Axenic Long-Term Cultivation ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  7. Article
  8. Detection ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  9. Article
  10. Article
  11. Journal of fungi (Basel, Switzerland) · 2021
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Gastrointestinal parasite infestation in the alpine mountain hare (International journal for parasitology. Parasites and wildlife · 2019
    Article
  17. Real-time PCR assay for screening Pneumocystis in free-living wild squirrels and river rats in Italy.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2018
    Article
  18. Review
  19. The Relationship betweenOBM genetics · 2018
    Article
  20. Fungi that Infect Humans.Microbiology spectrum · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

Haroon AkbarLaboratoire de Parasitologie (EA4547), Faculté de Pharmacie, Université Lille Nord de France (USDL), Lille, France.
Claire Pinçon
Cecile-Marie Aliouat-Denis
Sandra Derouiche
Maria-Lucia Taylor
Muriel Pottier
Laura-Helena Carreto-Binaghi
Antonio E González-González
Aurore Courpon
Véronique Barriel
Jacques Guillot
Magali Chabé
Roberto O Suarez-Alvarez
El Moukhtar Aliouat
Eduardo Dei-Cas
Christine Demanche
Centre National de la Recherche Scientifique · FRUniversité Lille Nord de France · FRUniversidad Nacional Autónoma de México · MXAdministración Nacional de Laboratorios e Institutos de Salud · ARÉcole Nationale Vétérinaire d'Alfort · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bats belong to a wide variety of species and occupy diversified habitats, from cities to the countryside. Their different diets (i.e., nectarivore, frugivore, insectivore, hematophage) lead Chiroptera to colonize a range of ecological niches. These flying mammals exert an undisputable impact on both ecosystems and circulation of pathogens that they harbor. Pneumocystis species are recognized as major opportunistic fungal pathogens which cause life-threatening pneumonia in severely immunocompromised or weakened mammals. Pneumocystis consists of a heterogeneous group of highly adapted host-specific fungal parasites that colonize a wide range of mammalian hosts. In the present study, 216 lungs of 19 bat species, sampled from diverse biotopes in the New and Old Worlds, were examined. Each bat species may be harboring a specific Pneumocystis species. We report 32.9% of Pneumocystis carriage in wild bats (41.9% in Microchiroptera). Ecological and behavioral factors (elevation, crowding, migration) seemed to influence the Pneumocystis carriage. This study suggests that Pneumocystis-host association may yield much information on Pneumocystis transmission, phylogeny, and biology in mammals. Moreover, the link between genetic variability of Pneumocystis isolated from populations of the same bat species and their geographic area could be exploited in terms of phylogeography.

Indexed as

Genetic VariationAnimalsCarrier StateChiropteraCluster AnalysisDNA, FungalDNA, MitochondrialDNA, RibosomalLungMolecular Sequence DataPhylogenyPneumocystisPneumonia, PneumocystisSequence Analysis, DNADNA, FungalDNA, MitochondrialDNA, Ribosomal

Identifiers

PMID23001662
PMCPMC3485942
OpenAlexW2011608269

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.