Evidence map›Paper›PMID 23001653›Full record

ArticleApplied and environmental microbiology2012

Different antibiotic resistance and sporulation properties within multiclonal Clostridium difficile PCR ribotypes 078, 126, and 033 in a single calf farm.

Valerija Zidaric, Bart Pardon, Tiago Dos Vultos, Piet Deprez, Michael Sebastiaan Maria Brouwer, Adam P Roberts, Adriano O Henriques, Maja Rupnik

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Antimicrobial resistance ofOne health (Amsterdam, Netherlands) · 2024
    Article
  4. Article
  5. Clostridioides difficile Sporulation.Advances in experimental medicine and biology · 2024
    Review
  6. Microorganisms · 2023
    Article
  7. Characterization of Food ChainMicroorganisms · 2023
    Article
  8. Transmission of antimicrobial resistance (AMR) during animal transport.EFSA journal. European Food Safety Authority · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Microorganisms · 2019
    Review
  13. Immunomodulatory effects ofJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2019
    Article
  14. Article
  15. Genomic Delineation of Zoonotic Origins ofFrontiers in public health · 2019
    Review
  16. Article
  17. Article
  18. Article
  19. Clostridium difficile in Food and Animals: A Comprehensive Review.Advances in experimental medicine and biology · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Valerija ZidaricInstitute of Public Health Maribor, Maribor, Slovenia.
Bart Pardon
Tiago Dos Vultos
Piet Deprez
Michael Sebastiaan Maria Brouwer
Adam P Roberts
Adriano O Henriques
Maja Rupnik
Ghent University · BEUniversidade Nova de Lisboa · PTUniversity College London · GBCentre of Excellence for Integrated Approaches in Chemistry and Biology of Proteins · SI

Funding

Medical Research Council G0601176
6 · The paper itself

Abstract

Clostridium difficile strains were sampled periodically from 50 animals at a single veal calf farm over a period of 6 months. At arrival, 10% of animals were C. difficile positive, and the peak incidence was determined to occur at the age of 18 days (16%). The prevalence then decreased, and at slaughter, C. difficile could not be isolated. Six different PCR ribotypes were detected, and strains within a single PCR ribotype could be differentiated further by pulsed-field gel electrophoresis (PFGE). The PCR ribotype diversity was high up to the animal age of 18 days, but at later sampling points, PCR ribotype 078 and the highly related PCR ribotype 126 predominated. Resistance to tetracycline, doxycycline, and erythromycin was detected, while all strains were susceptible to amoxicillin and metronidazole. Multiple variations of the resistance gene tet(M) were present at the same sampling point, and these changed over time. We have shown that PCR ribotypes often associated with cattle (ribotypes 078, 126, and 033) were not clonal but differed in PFGE type, sporulation properties, antibiotic sensitivities, and tetracycline resistance determinants, suggesting that multiple strains of the same PCR ribotype infected the calves and that calves were likely to be infected prior to arrival at the farm. Importantly, strains isolated at later time points were more likely to be resistant to tetracycline and erythromycin and showed higher early sporulation efficiencies in vitro, suggesting that these two properties converge to promote the persistence of C. difficile in the environment or in hosts.

Indexed as

Drug Resistance, BacterialRibotypingAnimalsAnti-Bacterial AgentsCattleClostridioides difficileDNA, BacterialElectrophoresis, Gel, Pulsed-FieldFecesGenetic VariationGenotypeMicrobial Sensitivity TestsMolecular Sequence DataSequence Analysis, DNASpores, BacterialAnti-Bacterial AgentsDNA, Bacterial

Identifiers

PMID23001653
PMCPMC3502897
OpenAlexW2123918417

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.