Evidence map›Paper›PMID 23000146›Full record

ArticleAmerican journal of human genetics2012

Nonsense mutations in AAGAB cause punctate palmoplantar keratoderma type Buschke-Fischer-Brauer.

Kathrin A Giehl, Gertrud N Eckstein, Sandra M Pasternack, Silke Praetzel-Wunder, Thomas Ruzicka, Peter Lichtner, Kerstin Seidl, Mike Rogers, Elisabeth Graf, Lutz Langbein and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 71 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Oligomer-to-monomer transition underlies the chaperone function of AAGAB in AP1/AP2 assembly.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. AGenes · 2020
    Article
  11. Review
  12. Coatopathies: Genetic Disorders of Protein Coats.Annual review of cell and developmental biology · 2019
    Review
  13. Article
  14. Article
  15. [Practical aspects of molecular diagnostics in genodermatoses].Der Hautarzt; Zeitschrift fur Dermatologie, Venerologie, und verwandte Gebiete · 2016
    Review
  16. Article
  17. Keratotic papules of palms and soles.Dermatology practical & conceptual · 2015
    Article
  18. The genetics of human skin disease.Cold Spring Harbor perspectives in medicine · 2014
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Kathrin A GiehlCenter for Rare and Genetic Skin Diseases, Department of Dermatology, Ludwig Maximilians University, 80337 Munich, Germany. kathrin.giehl@med.uni-muenchen.de
Gertrud N Eckstein
Sandra M Pasternack
Silke Praetzel-Wunder
Thomas Ruzicka
Peter Lichtner
Kerstin Seidl
Mike Rogers
Elisabeth Graf
Lutz Langbein
Markus Braun-Falco
Regina C Betz
Tim M Strom
Helmholtz Zentrum München · DELudwig-Maximilians-Universität München · DEGerman Cancer Research Center · DEUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Punctate palmoplantar keratodermas (PPKPs) are rare autosomal-dominant inherited skin diseases that are characterized by multiple hyperkeratotic plaques distributed on the palms and soles. To date, two different loci in chromosomal regions 15q22-15q24 and 8q24.13-8q24.21 have been reported. Pathogenic mutations, however, have yet to be identified. In order to elucidate the genetic cause of PPKP type Buschke-Fischer-Brauer (PPKP1), we performed exome sequencing in five affected individuals from three families, and we identified in chromosomal region 15q22.33-q23 two heterozygous nonsense mutations-c.370C>T (p.Arg124(∗)) and c.481C>T (p.Arg161(∗))-in AAGAB in all affected individuals. Using immunoblot analysis, we showed that both mutations result in premature termination of translation and truncated protein products. Analyses of mRNA of affected individuals revealed that the disease allele is either not detectable or only detectable at low levels. To assess the consequences of the mutations in skin, we performed immunofluorescence analyses. Notably, the amount of granular staining in the keratinocytes of affected individuals was lower in the cytoplasm but higher around the nucleus than it was in the keratinocytes of control individuals. AAGAB encodes the alpha-and gamma-adaptin-binding protein p34 and might play a role in membrane traffic as a chaperone. The identification of mutations, along with the results from additional studies, defines the genetic basis of PPKP1 and provides evidence that AAGAB plays an important role in skin integrity.

Indexed as

Codon, NonsenseAdaptor Proteins, Vesicular TransportAllelesCarrier ProteinsChromosomes, Human, Pair 15ExomeFemaleGenetic Predisposition to DiseaseHeterozygoteHumansKeratinocytesKeratoderma, PalmoplantarMalePedigreeProtein BiosynthesisRNA, MessengerAAGAB protein, humanAdaptor Proteins, Vesicular TransportCarrier ProteinsCodon, NonsenseRNA, Messenger

Identifiers

PMID23000146
PMCPMC3484507
OpenAlexW1968616658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.