Evidence map›Paper›PMID 22999781›Full record

ArticleJournal of Crohn's & colitis2013

Enzymes involved in L-carnitine biosynthesis are expressed by small intestinal enterocytes in mice: implications for gut health.

Prem S Shekhawat, Srinivas Sonne, A Lee Carter, Dietrich Matern, Vadivel Ganapathy

Open access · bronzeAbstract read
In one paragraph

Article in Journal of Crohn's & colitis, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. BioMed research international · 2022
    Review
  14. Article
  15. Article
  16. Observational
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Prem S ShekhawatDepartment of Pediatrics, Medical College of Georgia, Georgia Health Sciences University, Augusta, GA 30912, United States. shekhawatp@ecu.edu
Srinivas Sonne
A Lee Carter
Dietrich Matern
Vadivel Ganapathy
Augusta University · USAugusta University Health · USMayo Clinic · US

Funding

PLACENTAL CARNITINE: ROLE IN FETAL DEVELOPMENTK08HD048867 · NICHD · MEDICAL COLLEGE OF GEORGIA (MCG) · PI SHEKHAWAT, PREM S · 2005 to 2008
$434k
NICHD NIH HHS HD 048867NICHD NIH HHS K08 HD048867
6 · The paper itself

Abstract

backgroundCarnitine is essential for mitochondrial β-oxidation of long-chain fatty acids. Deficiency of carnitine leads to severe gut atrophy, ulceration and inflammation in animal models of carnitine deficiency. Genetic studies in large populations have linked mutations in the carnitine transporters OCTN1 and OCTN2 with Crohn's disease (CD), while other studies at the same time have failed to show a similar association and report normal serum carnitine levels in CD patients.

methodsIn this report, we have studied the expression of carnitine-synthesizing enzymes in intestinal epithelial cells to determine the capability of these cells to synthesize carnitine de novo. We studied expression of five enzymes involved in carnitine biosynthesis, namely 6-N-trimethyllysine dioxygenase (TMLD), 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH), serine hydroxymethyltransferase 1 and 2 (SHMT1 and 2) and γ-butyrobetaine hydroxylase (BBH) by real-time PCR in mice (C3H strain). We also measured activity of γ-BBH in the intestine using an ex vivo assay and localized its expression by in situ hybridization.

resultsOur investigations show that mouse intestinal epithelium expresses all five enzymes required for de novo carnitine biosynthesis; the expression is localized mainly in villous surface epithelial cells throughout the intestine. The final rate-limiting enzyme γ-BBH is highly active in the small intestine; its activity was 9.7 ± 3.5 pmol/mg/min, compared to 22.7 ± 7.3 pmol/mg/min in the liver.

conclusionsWe conclude that mouse gut epithelium is able to synthesize carnitine de novo. This capacity to synthesize carnitine in the intestine may play an important role in gut health and can help explain lack of clinical carnitine deficiency signs in subjects with mutations with OCTN transporters.

Indexed as

Aldehyde OxidoreductasesAnimalsCarnitineEnterocytesgamma-Butyrobetaine DioxygenaseGene ExpressionGlycine HydroxymethyltransferaseIn Situ HybridizationIntestinal MucosaIntestine, SmallMiceMice, Inbred C3HMixed Function OxygenasesReal-Time Polymerase Chain Reaction4-N-trimethylaminobutyraldehyde dehydrogenaseAldehyde OxidoreductasesCarnitineepsilon-N-trimethyllysine hydroxylasegamma-Butyrobetaine DioxygenaseGlycine HydroxymethyltransferaseMixed Function OxygenasesShmt1 protein, mouse

Identifiers

PMID22999781
PMCPMC3644392
OpenAlexW2038488855

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.