Evidence map›Paper›PMID 22993157›Full record

ArticleJournal of virology2012

Foot-and-mouth disease virus induces autophagosomes during cell entry via a class III phosphatidylinositol 3-kinase-independent pathway.

Stephen Berryman, Elizabeth Brooks, Alison Burman, Philippa Hawes, Rebecca Roberts, Christopher Netherton, Paul Monaghan, Matthew Whelband, Eleanor Cottam, Zvulun Elazar and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 114 citations in OpenAlex.

  1. Article
  2. Article
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  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Viruses and autophagy: bend, but don't break.Nature reviews. Microbiology · 2024
    Review
  11. Article
  12. Article
  13. Host Subcellular Organelles: Targets of Viral Manipulation.International journal of molecular sciences · 2024
    Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Seneca Valley virus 3CFrontiers in microbiology · 2023
    Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Stephen BerrymanInstitute for Animal Health, Pirbright Laboratories, Woking, Surrey, United Kingdom.
Elizabeth Brooks
Alison Burman
Philippa Hawes
Rebecca Roberts
Christopher Netherton
Paul Monaghan
Matthew Whelband
Eleanor Cottam
Zvulun Elazar
Terry Jackson
Thomas Wileman
The Pirbright Institute · GBUniversity of East Anglia · GBWeizmann Institute of Science · IL

Funding

Biotechnology and Biological Sciences Research Council BB/F012861/1Biotechnology and Biological Sciences Research Council BB/F013949/1Biotechnology and Biological Sciences Research Council BBS/E/I/00001440Biotechnology and Biological Sciences Research Council BBS/E/I/00001709
6 · The paper itself

Abstract

Autophagy is an intracellular pathway that can contribute to innate antiviral immunity by delivering viruses to lysosomes for degradation or can be beneficial for viruses by providing specialized membranes for virus replication. Here, we show that the picornavirus foot-and-mouth disease virus (FMDV) induces the formation of autophagosomes. Induction was dependent on Atg5, involved processing of LC3 to LC3II, and led to a redistribution of LC3 from the cytosol to punctate vesicles indicative of authentic autophagosomes. Furthermore, FMDV yields were reduced in cells lacking Atg5, suggesting that autophagy may facilitate FMDV infection. However, induction of autophagosomes by FMDV appeared to differ from starvation, as the generation of LC3 punctae was not inhibited by wortmannin, implying that FMDV-induced autophagosome formation does not require the class III phosphatidylinositol 3-kinase (PI3-kinase) activity of vps34. Unlike other picornaviruses, for which there is strong evidence that autophagosome formation is linked to expression of viral nonstructural proteins, FMDV induced autophagosomes very early during infection. Furthermore, autophagosomes could be triggered by either UV-inactivated virus or empty FMDV capsids, suggesting that autophagosome formation was activated during cell entry. Unlike other picornaviruses, FMDV-induced autophagosomes did not colocalize with the viral 3A or 3D protein. In contrast, ∼50% of the autophagosomes induced by FMDV colocalized with VP1. LC3 and VP1 also colocalized with the cellular adaptor protein p62, which normally targets ubiquitinated proteins to autophagosomes. These results suggest that FMDV induces autophagosomes during cell entry to facilitate infection, but not to provide membranes for replication.

Indexed as

Virus InternalizationAndrostadienesAnimalsAutophagyAutophagy-Related Protein 5Blotting, WesternCHO CellsClass III Phosphatidylinositol 3-KinasesCricetinaeCricetulusFoot-and-Mouth Disease VirusGreen Fluorescent ProteinsMiceMicroscopy, FluorescenceMicrotubule-Associated ProteinsPhagosomesAndrostadienesAtg5 protein, mouseAutophagy-Related Protein 5Class III Phosphatidylinositol 3-KinasesGreen Fluorescent ProteinsMap1lc3b protein, mouseMicrotubule-Associated ProteinsWortmannin

Identifiers

PMID22993157
PMCPMC3497631
OpenAlexW2095723312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.