ArticleMammalian genome : official journal of the International Mammalian Genome Society2012
Accessing data from the International Mouse Phenotyping Consortium: state of the art and future plans.
Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
20 citing papers in PubMed, 38 citations in OpenAlex.
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- The anatomy of phenotype ontologies: principles, properties and applications.Briefings in bioinformatics · 2018Article
- An efficient method for generation of bi-allelic null mutant mouse embryonic stem cells and its application for investigating epigenetic modifiers.Nucleic acids research · 2017Article
- Polygenic Causes of Congenital Diaphragmatic Hernia Produce Common Lung Pathologies.The American journal of pathology · 2016Review
- A mouse informatics platform for phenotypic and translational discovery.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Article
- The International Mouse Strain Resource (IMSR): cataloging worldwide mouse and ES cell line resources.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Article
- The BioMart community portal: an innovative alternative to large, centralized data repositories.Nucleic acids research · 2015Article
- Utilising the resources of the International Knockout Mouse Consortium: the Australian experience.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Article
- Using association rule mining to determine promising secondary phenotyping hypotheses.Bioinformatics (Oxford, England) · 2014Article
- Histopathology reveals correlative and unique phenotypes in a high-throughput mouse phenotyping screen.Disease models & mechanisms · 2014Article
- Phenotype ontologies and cross-species analysis for translational research.PLoS genetics · 2014Review
- Legal agreements and the governance of research commons: lessons from materials sharing in mouse genomics.Omics : a journal of integrative biology · 2014Article
- Ensembl 2014.Nucleic acids research · 2014Article
- The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse.Nucleic acids research · 2014Article
- The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.Nucleic acids research · 2014Article
- Mouse models for liver cancer.Molecular oncology · 2013Review
- Chromosome substitution strains: gene discovery, functional analysis, and systems studies.Mammalian genome : official journal of the International Mammalian Genome Society · 2012Review
- The International Mouse Phenotyping Consortium: past and future perspectives on mouse phenotyping.Mammalian genome : official journal of the International Mammalian Genome Society · 2012Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors at 3 institutions in 1 country.
Funding
Abstract
The International Mouse Phenotyping Consortium (IMPC) (http://www.mousephenotype.org) will reveal the pleiotropic functions of every gene in the mouse genome and uncover the wider role of genetic loci within diverse biological systems. Comprehensive informatics solutions are vital to ensuring that this vast array of data is captured in a standardised manner and made accessible to the scientific community for interrogation and analysis. Here we review the existing EuroPhenome and WTSI phenotype informatics systems and the IKMC portal, and present plans for extending these systems and lessons learned to the development of a robust IMPC informatics infrastructure.
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.