Evidence map›Paper›PMID 22989952›Full record

ArticleBiochimica et biophysica acta

The bZIP repressor proteins, c-Jun dimerization protein 2 and activating transcription factor 3, recruit multiple HDAC members to the ATF3 promoter.

Ilona Darlyuk-Saadon, Keren Weidenfeld-Baranboim, Kazunari K Yokoyama, Tsonwin Hai, Ami Aronheim

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
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  12. Induction of heparanase 2 (Hpa2) expression by stress is mediated by ATF3.Matrix biology : journal of the International Society for Matrix Biology · 2022
    Article
  13. Article
  14. Review
  15. PWWP2B Fine-Tunes Adipose Thermogenesis by Stabilizing HDACs in a NuRD Subcomplex.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Article
  16. JDP2, a Novel Molecular Key in Heart Failure and Atrial Fibrillation?International journal of molecular sciences · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Ilona Darlyuk-SaadonDepartment of Molecular Genetics, Technion-Israel Institute of Technology, Haifa, Israel. ilona.darlyuk@gmail.com
Keren Weidenfeld-Baranboim
Kazunari K Yokoyama
Tsonwin Hai
Ami Aronheim
Rappaport Family Institute for Research in the Medical Sciences · ILKaohsiung Medical University · TWTechnion – Israel Institute of Technology · ILThe Ohio State University · US

Funding

ATF3, a stress-inducible gene, in tumorigenesis and metastasisR01CA118306 · NCI · OHIO STATE UNIVERSITY · PI HAI, TSONWIN · 2008 to 2011
$1.0M
A mouse model for genetic tracing to study stress responsesR21ES021018 · NIEHS · OHIO STATE UNIVERSITY · PI HAI, TSONWIN · 2012 to 2013
$416k
NCI NIH HHS R01 CA118306NIEHS NIH HHS R21 ES021018
6 · The paper itself

Abstract

JDP2, is a basic leucine zipper (bZIP) protein displaying a high degree of homology with the stress inducible transcription factor, ATF3. Both proteins bind to cAMP and TPA response elements and repress transcription by multiple mechanisms. Histone deacetylases (HDACs) play a key role in gene inactivation by deacetylating lysine residues on histones. Here we describe the association of JDP2 and ATF3 with HDACs 1, 2-6 and 10. Association of HDAC3 and HDAC6 with JDP2 and ATF3 occurs via direct protein-protein interactions. Only part of the N-terminal bZIP motif of JDP2 and ATF3 basic domain is necessary and sufficient for the interaction with HDACs in a manner that is independent of coiled-coil dimerization. Class I HDACs associate with the bZIP repressors via the DAC conserved domain whereas the Class IIb HDAC6 associates through its C-terminal unique binder of ubiquitin Zn finger domain. Both JDP2 and ATF3 are known to bind and repress the ATF3 promoter. MEF cells treated with histone deacetylase inhibitor, trichostatin A (TSA) display enhanced ATF3 transcription. ATF3 enhanced transcription is significantly reduced in MEF cells lacking both ATF3 and JDP2. Collectively, we propose that the recruitment of multiple HDAC members to JDP2 and ATF3 is part of their transcription repression mechanism.

Indexed as

Activating Transcription Factor 3Amino Acid MotifsAnimalsCell LineHistone Deacetylase InhibitorsHistone DeacetylasesHumansHydroxamic AcidsMiceMice, KnockoutPromoter Regions, GeneticProtein MultimerizationRepressor ProteinsTranscription, GeneticZinc FingersActivating Transcription Factor 3ATF3 protein, humanAtf3 protein, mouseHistone Deacetylase InhibitorsHistone DeacetylasesHydroxamic AcidsJDP2 protein, humanJundp2 protein, mouseRepressor Proteinstrichostatin A

Identifiers

PMID22989952
PMCPMC3551276
OpenAlexW2009106854

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.