Evidence map›Paper›PMID 22988430›Full record

ArticleFrontiers in neuroscience2012

A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.

Carrie B Wiese, Sara Ireland, Nicole L Fleming, Jing Yu, M Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H Little and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neuroscience, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 17 citations in OpenAlex.

  1. Innervation in organogenesis.Current topics in developmental biology · 2022
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Urinary tract effects of HPSE2 mutations.Journal of the American Society of Nephrology : JASN · 2015
    Article
  12. Developing a functional urinary bladder: a neuronal context.Frontiers in cell and developmental biology · 2015
    Review
  13. Review
  14. Genetics of human congenital urinary bladder disease.Pediatric nephrology (Berlin, Germany) · 2014
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Carrie B WieseDivision of Genetic Medicine, Department of Medicine, Vanderbilt University School of Medicine Nashville, TN, USA.
Sara Ireland
Nicole L Fleming
Jing Yu
M Todd Valerius
Kylie Georgas
Han Sheng Chiu
Jane Brennan
Jane Armstrong
Melissa H Little
Andrew P McMahon
E Michelle Southard-Smith
Vanderbilt University Medical Center · USUniversity of Queensland · AUUniversity of Edinburgh · GBBeth Israel Deaconess Medical Center · USHarvard University · USUniversity of Virginia · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI STACIE B DUSETZINA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Vanderbilt Diabetes Research CenterP30DK020593 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ALVIN C POWERS · 2012 to 2026
$29.3M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI David J. Calkins · 1989 to 2026
$19.6M
THREE-TIERED PREVENTION MODEL TO BETTER SERVE ALL STUDENP30HD015052 · NICHD · VANDERBILT UNIVERSITY · PI HARRELL, FRANK E. · 1985 to 2014
$18.6M
Vanderbilt Mouse Metabolic Physiology CenterU24DK059637 · NIDDK · VANDERBILT UNIVERSITY · PI WASSERMAN, DAVID H · 2001 to 2015
$14.9M
Kidney molecular atlas projectU01DK070181 · NIDDK · HARVARD UNIVERSITY · PI MCMAHON, ANDREW P. · 2004 to 2010
$5.9M
Murine Atlas of Genitourinary Smooth Muscle DevelopmentU01DK070219 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI LESSARD, JAMES LOUIS · 2005 to 2009
$4.3M
Murine Atlas of Genitourinary DevelopmentU01DK070136 · NIDDK · UNIVERSITY OF QUEENSLAND · PI LITTLE, MELISSA HELEN · 2004 to 2009
$2.2M
Neural Crest Contributions to the Lower Urinary TractR01DK078158 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SOUTHARD-SMITH, E MICHELLE · 2007 to 2017
$2.1M
Gene Networks in Neural Crest-derived Innervation of the Lower Urinary TractRC1DK086594 · NIDDK · VANDERBILT UNIVERSITY · PI SOUTHARD-SMITH, E MICHELLE · 2009 to 2010
$738k
NCI NIH HHS P30 CA068485NEI NIH HHS P30 EY008126NICHD NIH HHS P30 HD015052NIDDK NIH HHS P30 DK020593NIDDK NIH HHS P30 DK058404NIDDK NIH HHS R01 DK078158NIDDK NIH HHS RC1 DK086594NIDDK NIH HHS U01 DK070136NIDDK NIH HHS U01 DK070181NIDDK NIH HHS U01 DK070219NIDDK NIH HHS U24 DK059637
6 · The paper itself

Abstract

Relative positions of neurons within mature murine pelvic ganglia based on expression of neurotransmitters have been described. However the spatial organization of developing innervation in the murine urogenital tract (UGT) and the gene networks that regulate specification and maturation of neurons within the pelvic ganglia of the lower urinary tract (LUT) are unknown. We used whole-mount immunohistochemistry and histochemical stains to localize neural elements in 15.5 days post coitus (dpc) fetal mice. To identify potential regulatory factors expressed in pelvic ganglia, we surveyed expression patterns for known or probable transcription factors (TF) annotated in the mouse genome by screening a whole-mount in situ hybridization library of fetal UGTs. Of the 155 genes detected in pelvic ganglia, 88 encode TFs based on the presence of predicted DNA-binding domains. Neural crest (NC)-derived progenitors within the LUT were labeled by Sox10, a well-known regulator of NC development. Genes identified were categorized based on patterns of restricted expression in pelvic ganglia, pelvic ganglia and urethral epithelium, or pelvic ganglia and urethral mesenchyme. Gene expression patterns and the distribution of Sox10+, Phox2b+, Hu+, and PGP9.5+ cells within developing ganglia suggest previously unrecognized regional segregation of Sox10+ progenitors and differentiating neurons in early development of pelvic ganglia. Reverse transcription-PCR of pelvic ganglia RNA from fetal and post-natal stages demonstrated that multiple TFs maintain post-natal expression, although Pax3 is extinguished before weaning. Our analysis identifies multiple potential regulatory genes including TFs that may participate in segregation of discrete lineages within pelvic ganglia. The genes identified here are attractive candidate disease genes that may now be further investigated for their roles in malformation syndromes or in LUT dysfunction.

Indexed as

autonomic nervous systemgenitourinaryGenitourinary Development Molecular Anatomy Projectin situ hybridizationlower urinary tractmousepelvic gangliatranscription factor

Identifiers

PMID22988430
PMCPMC3439845
OpenAlexW2111951373

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.