Evidence map›Paper›PMID 22988236›Full record

ArticleThe Journal of biological chemistry2012

Vascular bioactivation of nitroglycerin by aldehyde dehydrogenase-2: reaction intermediates revealed by crystallography and mass spectrometry.

Barbara S Lang, Antonius C F Gorren, Gustav Oberdorfer, M Verena Wenzl, Cristina M Furdui, Leslie B Poole, Bernd Mayer, Karl Gruber

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

  1. Trial
  2. Mass Spectrometry- and Structural Biology-Based Investigation of Proteins.Advances in experimental medicine and biology · 2026
    Review
  3. Article
  4. Article
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  6. Thiol and HJournal of the American Chemical Society · 2023
    Article
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  10. Article
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  12. Article
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  15. Article
  16. Review
  17. Article
  18. Expression, crystallization and preliminary X-ray crystallographic analysis of cellobiose 2-epimerase from Dictyoglomus turgidum DSM 6724.Acta crystallographica. Section F, Structural biology and crystallization communications · 2013
    Article
  19. Expression, crystallization and preliminary X-ray crystallographic analysis of alcohol dehydrogenase (ADH) from Kangiella koreensis.Acta crystallographica. Section F, Structural biology and crystallization communications · 2013
    Article
  20. Expression, crystallization and preliminary X-ray crystallographic analysis of aldehyde dehydrogenase (ALDH) from Bacillus cereus.Acta crystallographica. Section F, Structural biology and crystallization communications · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Barbara S LangDepartment of Pharmacology and Toxicology, University of Graz, 8010 Graz, Austria.
Antonius C F Gorren
Gustav Oberdorfer
M Verena Wenzl
Cristina M Furdui
Leslie B Poole
Bernd Mayer
Karl Gruber
University of Graz · ATWake Forest University · USBioTechMed-Graz · AT

Funding

Mechanistic Studies of Alkyl Hydroperoxide Reductase and Related Redox SystemsR01GM050389 · NIGMS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI POOLE, LESLIE B · 1994 to 2013
$4.8M
NIGMS NIH HHS R01 GM050389NIGMS NIH HHS R01GM050389
6 · The paper itself

Abstract

Aldehyde dehydrogenase-2 (ALDH2) catalyzes the bioactivation of nitroglycerin (glyceryl trinitrate, GTN) in blood vessels, resulting in vasodilation by nitric oxide (NO) or a related species. Because the mechanism of this reaction is still unclear we determined the three-dimensional structures of wild-type (WT) ALDH2 and of a triple mutant of the protein that exhibits low denitration activity (E268Q/C301S/C303S) in complex with GTN. The structure of the triple mutant showed that GTN binds to the active site via polar contacts to the oxyanion hole and to residues 268 and 301 as well as by van der Waals interactions to hydrophobic residues of the catalytic pocket. The structure of the GTN-soaked wild-type protein revealed a thionitrate adduct to Cys-302 as the first reaction intermediate, which was also found by mass spectrometry (MS) experiments. In addition, the MS data identified sulfinic acid as the irreversibly inactivated enzyme species. Assuming that the structures of the triple mutant and wild-type ALDH2 reflect binding of GTN to the catalytic site and the first reaction step, respectively, superposition of the two structures indicates that denitration of GTN is initiated by nucleophilic attack of Cys-302 at one of the terminal nitrate groups, resulting in formation of the observed thionitrate intermediate and release of 1,2-glyceryl dinitrate. Our results shed light on the molecular mechanism of the GTN denitration reaction and provide useful information on the structural requirements for high affinity binding of organic nitrates to the catalytic site of ALDH2.

Indexed as

Aldehyde DehydrogenaseAldehyde Dehydrogenase, MitochondrialAmino Acid SubstitutionBiocatalysisBlood VesselsCatalytic DomainCrystallography, X-RayElectrophoresis, Polyacrylamide GelHumansIsoflavonesMass SpectrometryModels, MolecularMolecular StructureMutant ProteinsMutationNitratesAldehyde DehydrogenaseAldehyde Dehydrogenase, MitochondrialALDH2 protein, humandaidzinIsoflavonesMutant ProteinsNitratesNitroglycerinSulfur Compounds

Identifiers

PMID22988236
PMCPMC3488082
OpenAlexW2089536861

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.