Evidence map›Paper›PMID 22988097›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Development of promyelocytic leukemia zinc finger-expressing innate CD4 T cells requires stronger T-cell receptor signals than conventional CD4 T cells.

Yu Qiao, Lingqiao Zhu, Hanief Sofi, Philip E Lapinski, Reiko Horai, Kristen Mueller, Gretta L Stritesky, Xi He, Hung-Sia Teh, David L Wiest and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Thymic low affinity/avidity interaction selects natural Th1 cells.Journal of immunology (Baltimore, Md. : 1950) · 2015
    Article
  5. Article
  6. Innate PLZF+CD4+ αβ T cells develop and expand in the absence of Itk.Journal of immunology (Baltimore, Md. : 1950) · 2014
    Article
  7. Article
  8. A transgenic TCR directs the development of IL-4+ and PLZF+ innate CD4 T cells.Journal of immunology (Baltimore, Md. : 1950) · 2013
    Article
  9. Transcriptional regulation of the NKT cell lineage.Current opinion in immunology · 2013
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Yu QiaoDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA.
Lingqiao Zhu
Hanief Sofi
Philip E Lapinski
Reiko Horai
Kristen Mueller
Gretta L Stritesky
Xi He
Hung-Sia Teh
David L Wiest
Dietmar J Kappes
Philip D King
Kristin A Hogquist
Pamela L Schwartzberg
Derek B Sant'Angelo
Cheong-Hee Chang
University of Michigan · USFox Chase Cancer Center · USNational Human Genome Research Institute · USUniversity of Minnesota Medical Center · USNational Institutes of Health · USUniversity of British Columbia · CA

Funding

TRANSCRIPTIONAL PROFILINGP30CA072720 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI Shridar Ganesan · 1997 to 2026
$94.5M
Genetic and Biochemical Approaches to Tyrosine Kinase FunctionZIAHG000123 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI SCHWARTZBERG, PAMELA · 2009 to 2018
$20.8M
TRAINING GRANT IN MICROBIOLOGY/CANCER RESEARCHT32CA009138 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Scott M. Dehm · 1985 to 2026
$11.3M
TCR signal strength in thymic selectionR37AI039560 · NIAID · UNIVERSITY OF MINNESOTA · PI HOGQUIST, KRISTIN A. · 2012 to 2021
$3.7M
Immunobiology of NKT cell development and functionR01AI059739 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI SANT'ANGELO, DEREK B. · 2006 to 2010
$2.5M
The function of PLZF in innate T cellsR01AI083988 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI SANT'ANGELO, DEREK B. · 2010 to 2014
$2.2M
Control of Lineage Commitment in Developing ThymocytesR01CA153260 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI KAPPES, DIETMAR J · 2010 to 2014
$1.9M
Immune regulation by thymocyte-selected CD4 T cellsR01AI073677 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHANG, CHEONG-HEE · 2009 to 2013
$1.6M
RASA1-mediated control of lymphatic vessel growth and functionR01HL096498 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KING, PHILIP D · 2009 to 2012
$1.4M
Immune regulation by thymocyte-selected CD4 T cellsR56AI073677 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHANG, CHEONG-HEE · 2008 to 2008
$357k
NCI NIH HHS CA153260NCI NIH HHS P30 CA072720NCI NIH HHS R01 CA153260NCI NIH HHS T32 CA009138NHLBI NIH HHS HL096498NHLBI NIH HHS R01 HL096498NIAID NIH HHS AI059739NIAID NIH HHS AI073677NIAID NIH HHS AI083988NIAID NIH HHS R01 AI059739NIAID NIH HHS R01 AI073677NIAID NIH HHS R01 AI083988NIAID NIH HHS R37 AI039560NIAID NIH HHS R56 AI073677
6 · The paper itself

Abstract

MHC class II-expressing thymocytes and thymic epithelial cells can mediate CD4 T-cell selection resulting in functionally distinct thymocyte-selected CD4 (T-CD4) and epithelial-selected CD4 (E-CD4) T cells, respectively. However, little is known about how T-cell receptor (TCR) signaling influences the development of these two CD4 T-cell subsets. To study TCR signaling for T-CD4 T-cell development, we used a GFP reporter system of Nur77 in which GFP intensity directly correlates with TCR signaling strength. T-CD4 T cells expressed higher levels of GFP than E-CD4 T cells, suggesting that T-CD4 T cells received stronger TCR signaling than E-CD4 T cells during selection. Elimination of Ras GTPase-activating protein enhanced E-CD4 but decreased T-CD4 T-cell selection efficiency, suggesting a shift to negative selection. Conversely, the absence of IL-2-inducible T-cell kinase that causes poor E-CD4 T-cell selection due to insufficient TCR signaling improved T-CD4 T-cell generation, consistent with rescue from negative selection. Strong TCR signaling during T-CD4 T-cell development correlates with the expression of the transcription factor promyelocytic leukemia zinc finger protein. However, although modulation of the signaling strength affected the efficiency of T-CD4 T-cell development during positive and negative selection, the signaling strength is not as important for the effector function of T-CD4 T cells. These findings indicate that innate T-CD4 T cells, together with invariant natural killer T cells and γδ T cells, receive strong TCR signals during their development and that signaling requirements for the development and the effector functions are distinct.

Indexed as

AnimalsBone Marrow TransplantationCD4-Positive T-LymphocytesCell DifferentiationEpitheliumFlow CytometryGreen Fluorescent ProteinsGuanine Nucleotide Exchange FactorsKruppel-Like Transcription FactorsMiceMice, KnockoutPromyelocytic Leukemia Zinc Finger ProteinProtein-Tyrosine KinasesReceptors, Antigen, T-CellSignal TransductionT-Cell Antigen Receptor Specificityemt protein-tyrosine kinaseGreen Fluorescent ProteinsGuanine Nucleotide Exchange FactorsKruppel-Like Transcription FactorsPromyelocytic Leukemia Zinc Finger ProteinProtein-Tyrosine KinasesRasgrp1 protein, mouseReceptors, Antigen, T-CellZbtb16 protein, mouse

Identifiers

PMID22988097
PMCPMC3479572
OpenAlexW1979613888

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.