Evidence map›Paper›PMID 22987115›Full record

ArticlePlant molecular biology2012

Transcriptomic changes and signalling pathways induced by arsenic stress in rice roots.

Tsai-Lien Huang, Quynh Thi Thuy Nguyen, Shih-Feng Fu, Chung-Yi Lin, Ying-Chih Chen, Hao-Jen Huang

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Article in Plant molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Review
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  5. Article
  6. Cadmium Alters the Metabolism and Perception of Abscisic Acid inInternational journal of molecular sciences · 2024
    Article
  7. Review
  8. Review
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  10. Article
  11. Article
  12. Article
  13. Review
  14. Overexpression ofInternational journal of molecular sciences · 2023
    Article
  15. Review
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tsai-Lien HuangDepartment of Life Sciences, National Cheng Kung University, No. 1 University Road, 701 Tainan City, Taiwan.
Quynh Thi Thuy Nguyen
Shih-Feng Fu
Chung-Yi Lin
Ying-Chih Chen
Hao-Jen Huang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arsenic (As) is considered the most common toxic metalloid, but its molecular mode of action is not well understood. We investigated whether arsenate [As(V)] can induce intracellular reactive oxygen species production and calcium oscillation in rice roots. To better understand the molecular basis of plant cell responses to As, we performed a large-scale analysis of the rice transcriptome during As(V) stress. As(V) induced genes involved in abiotic stress, detoxification pathways and secondary metabolic process. Genes involved in secondary cell wall biogenesis, cell cycle and oligopeptide transport were mainly downregulated. Genes encoding signalling components such as receptor-like cytoplasmic kinases protein kinase, APETALA2/ethylene response factor, heat shock factor, MYB and zinc-finger protein expressed in inflorescence meristem transcription factors were increased in expression. The expression of GARP-G2-like and C3H transcription factors was specifically modulated by As(V) stress. The predominant families of As(V)-regulated transporters belonged to the ATP-binding cassette superfamily and telurite-resistance/dicarboxylate transporters. Several factors involved in signaling, such as mitogen-activated protein kinase (MAPK), MAPK kinase kinase and calcium-dependent protein kinase (CDPK), were also upregulated. Moreover, As(V) markedly increased the activity of MAPKs and CDPK-like kinases, and CDPK and NADPH oxidases were involved in As-induced MAPK activation. Further characterization of these As(V)-responsive genes and signalling pathways may help better understand the mechanisms of metalloid uptake, tolerance and detoxification in plants.

Indexed as

ArsenatesCalcium SignalingEnvironmental PollutantsGenes, PlantInactivation, MetabolicMAP Kinase Signaling SystemModels, BiologicalOryzaPhytochelatinsPlant Growth RegulatorsPlant ProteinsPlant RootsReactive Oxygen SpeciesSignal TransductionStress, PhysiologicalTranscription FactorsArsenatesarsenic acidEnvironmental PollutantsPhytochelatinsPlant Growth RegulatorsPlant ProteinsReactive Oxygen SpeciesTranscription Factors

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.