Evidence map›Paper›PMID 22985493›Full record

ArticleBJU international2013

Common genetic variants associated with disease from genome-wide association studies are mutually exclusive in prostate cancer and rheumatoid arthritis.

Gisela Orozco, Chee L Goh, Ali Amin Al Olama, Sara Benlloch-Garcia, Koveela Govindasami, Michelle Guy, Kenneth R Muir, Graham G Giles, Gianluca Severi, David E Neal and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in BJU international, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 2 countries.

Gisela OrozcoArthritis Research UK Epidemiology Unit, School of Translational Medicine, University of Manchester, Manchester, UK.
Chee L Goh
Ali Amin Al Olama
Sara Benlloch-Garcia
Koveela Govindasami
Michelle Guy
Kenneth R Muir
Graham G Giles
Gianluca Severi
David E Neal
Freddie C Hamdy
Jenny L Donovan
Zsofia Kote-Jarai
Douglas F Easton
Steve Eyre
Rosalind A Eeles
Institute of Cancer Research · GBUniversity of Cambridge · GBThe University of Melbourne · AUUniversity of Manchester · GBJohn Radcliffe Hospital · GBRoyal Marsden NHS Foundation Trust · GBUniversity of Bristol · GBUniversity of Warwick · GB

Funding

Epidemiological and Clinical Translational Studies Post Genome-Wide AssociationU19CA148537 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI EASTON, DOUGLAS FREDERICK, EELES, ROSALIND · 2010 to 2014
$10.4M
Cancer Research UK 10118Cancer Research UK 11022Cancer Research UK 15007Cancer Research UK C5047/A10692Medical Research Council G0900871NCI NIH HHS U19 CA148537NCI NIH HHS U19CA148537Wellcome TrustWellcome Trust 095684/Z/11/A
6 · The paper itself

Abstract

unlabelledWHAT'S KNOWN ON THE SUBJECT? AND WHAT DOES THE STUDY ADD?: The link between inflammation and cancer has long been reported and inflammation is thought to play a role in the pathogenesis of many cancers, including prostate cancer (PrCa). Over the last 5 years, genome-wide association studies (GWAS) have reported numerous susceptibility loci that predispose individuals to many different traits. The present study aims to ascertain if there are common genetic risk profiles that might predispose individuals to both PrCa and the autoimmune inflammatory condition, rheumatoid arthritis. These results could have potential public heath impact in terms of screening and chemoprevention.

objectivesTo investigate if potential common pathways exist for the pathogenesis of autoimmune disease and prostate cancer (PrCa). To ascertain if the single nucleotide polymorphisms (SNPs) reported by genome-wide association studies (GWAS) as being associated with susceptibility to PrCa are also associated with susceptibility to the autoimmune disease rheumatoid arthritis (RA). MATERIALS AND

methodsThe original Wellcome Trust Case Control Consortium (WTCCC) UK RA GWAS study was expanded to include a total of 3221 cases and 5272 controls. In all, 37 germline autosomal SNPs at genome-wide significance associated with PrCa risk were identified from a UK/Australian PrCa GWAS. Allele frequencies were compared for these 37 SNPs between RA cases and controls using a chi-squared trend test and corrected for multiple testing (Bonferroni).

resultsIn all, 33 SNPs were able to be analysed in the RA dataset. Proxies could not be located for the SNPs in 3q26, 5p15 and for two SNPs in 17q12. After applying a Bonferroni correction for the number of SNPs tested, the SNP mapping to CCHCR1 (rs130067) retained statistically significant evidence for association (P = 6 × 10(-4) ; odds ratio [OR] = 1.15, 95% CI: 1.06-1.24); this has also been associated with psoriasis. However, further analyses showed that the association of this allele was due to confounding by RA-associated HLA-DRB1 alleles.

conclusionsThere is currently no evidence that SNPs associated with PrCa at genome-wide significance are associated with the development of RA. Studies like this are important in determining if common genetic risk profiles might predispose individuals to many diseases, which could have implications for public health in terms of screening and chemoprevention.

Indexed as

Polymorphism, Single NucleotideArthritis, RheumatoidAustraliaGene FrequencyGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHLA-DRB1 ChainsHumansMaleOdds RatioProstatic NeoplasmsQuantitative Trait LociReproducibility of ResultsUnited KingdomHLA-DRB1 Chains

Identifiers

PMID22985493
PMCPMC4491307
OpenAlexW2129369828

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.