Evidence map›Paper›PMID 22982992›Full record

SynthesisNature2012

FTO genotype is associated with phenotypic variability of body mass index.

Jian Yang, Ruth J F Loos, Joseph E Powell, Sarah E Medland, Elizabeth K Speliotes, Daniel I Chasman, Lynda M Rose, Gudmar Thorleifsson, Valgerdur Steinthorsdottir, Reedik Mägi and 162 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 262 papers, 11 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
262citing papers in PubMed, 11 pooled it
27.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

262 citing papers in PubMed, 11 syntheses or guidelines pooled it, 450 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
  7. Pooled it
  8. Pooled it
  9. Pooled it
  10. Pooled it
  11. Pooled it
  12. Trial
  13. Article
  14. Article
  15. Article
  16. Article
  17. Frontiers in immunology · 2026
    Article
  18. Article
  19. Article
  20. Interactions with polygenic background impact quantitative traits in the UK Biobank.medRxiv : the preprint server for health sciences · 2025
    Article

202 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

172 authors at 20 institutions in 14 countries.

Jian YangUniversity of Queensland Diamantina Institute, The University of Queensland, Princess Alexandra Hospital, Brisbane, Queensland 4102, Australia.
Ruth J F Loos
Joseph E Powell
Sarah E Medland
Elizabeth K Speliotes
Daniel I Chasman
Lynda M Rose
Gudmar Thorleifsson
Valgerdur Steinthorsdottir
Reedik Mägi
Lindsay Waite
Albert Vernon Smith
Laura M Yerges-Armstrong
Keri L Monda
David Hadley
Anubha Mahajan
Guo Li
Karen Kapur
Veronique Vitart
Jennifer E Huffman
Sophie R Wang
Cameron Palmer
Tõnu Esko
Krista Fischer
Jing Hua Zhao
Ayşe Demirkan
Aaron Isaacs
Mary F Feitosa
Jian'an Luan
Nancy L Heard-Costa
Charles White
Anne U Jackson
Michael Preuss
Andreas Ziegler
Joel Eriksson
Zoltán Kutalik
Francesca Frau
Ilja M Nolte
Jana V Van Vliet-Ostaptchouk
Jouke-Jan Hottenga
Kevin B Jacobs
Niek Verweij
Anuj Goel
Carolina Medina-Gomez
Karol Estrada
Jennifer Lynn Bragg-Gresham
Serena Sanna
Carlo Sidore
Jonathan Tyrer
Alexander Teumer
Inga Prokopenko
Massimo Mangino
Cecilia M Lindgren
Themistocles L Assimes
Alan R Shuldiner
Jennie Hui
John P Beilby
Wendy L McArdle
Per Hall
Talin Haritunians
Lina Zgaga
Ivana Kolcic
Ozren Polasek
Tatijana Zemunik
Ben A Oostra
M Juhani Junttila
Henrik Grönberg
Stefan Schreiber
Annette Peters
Andrew A Hicks
Jonathan Stephens
Nicola S Foad
Jaana Laitinen
Anneli Pouta
Marika Kaakinen
Gonneke Willemsen
Jacqueline M Vink
Sarah H Wild
Gerjan Navis
Folkert W Asselbergs
Georg Homuth
Ulrich John
Carlos Iribarren
Tamara Harris
Lenore Launer
Vilmundur Gudnason
Jeffrey R O'Connell
Eric Boerwinkle
Gemma Cadby
Lyle J Palmer
Alan L James
Arthur W Musk
Erik Ingelsson
Bruce M Psaty
Jacques S Beckmann
Gerard Waeber
Peter Vollenweider
Caroline Hayward
Alan F Wright
Igor Rudan
Leif C Groop
Andres Metspalu
Kay Tee Khaw
Cornelia M van Duijn
Ingrid B Borecki
Michael A Province
Nicholas J Wareham
Jean-Claude Tardif
Heikki V Huikuri
L Adrienne Cupples
Larry D Atwood
Caroline S Fox
Michael Boehnke
Francis S Collins
Karen L Mohlke
Jeanette Erdmann
Heribert Schunkert
Christian Hengstenberg
Klaus Stark
Mattias Lorentzon
Claes Ohlsson
Daniele Cusi
Jan A Staessen
Melanie M Van der Klauw
Peter P Pramstaller
Sekar Kathiresan
Jennifer D Jolley
Samuli Ripatti
Marjo-Riitta Jarvelin
Eco J C de Geus
Dorret I Boomsma
Brenda Penninx
James F Wilson
Harry Campbell
Stephen J Chanock
Pim van der Harst
Anders Hamsten
Hugh Watkins
Albert Hofman
Jacqueline C Witteman
M Carola Zillikens
André G Uitterlinden
Fernando Rivadeneira
M Carola Zillikens
Lambertus A Kiemeney
Sita H Vermeulen
Goncalo R Abecasis
David Schlessinger
Sabine Schipf
Michael Stumvoll
Anke Tönjes
Tim D Spector
Kari E North
Guillaume Lettre
Mark I McCarthy
Sonja I Berndt
Andrew C Heath
Pamela A F Madden
Dale R Nyholt
Grant W Montgomery
Nicholas G Martin
Barbara McKnight
David P Strachan
William G Hill
Harold Snieder
Paul M Ridker
Unnur Thorsteinsdottir
Kari Stefansson
Timothy M Frayling
Joel N Hirschhorn
Michael E Goddard
Peter M Visscher
University of Edinburgh · GBUniversity of Michigan · USErasmus University Rotterdam · NLUniversity of Cambridge · GBWashington University in St. Louis · USBoston University · USKarolinska Institutet · SEMRC Epidemiology Unit · GBNetherlands Consortium for Healthy Ageing · NLQIMR Berghofer Medical Research Institute · AUThe University of Western Australia · AUUniversitätsmedizin Greifswald · DEUniversity Medical Center Groningen · NLUniversity of Groningen · NLUniversity of Lübeck · DEUniversity of Oxford · GBUniversity of Tartu · EEErasmus MC · NLNational Institutes of Health · USUniversity of Gothenburg · SE

Funding

Type 1 Diabetes Genetics ConsortiumU01DK062418 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI RICH, STEPHEN S. · 2002 to 2007
$59.8M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PETER J TONTONOZ · 2003 to 2026
$40.4M
Genetic analysis of type II diabetes in Finnish populationZIAHG000024 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ERDOS, MICHAEL · 2009 to 2025
$38.2M
Pharmacogenomics and Risk of Cardiovascular DiseaseU01HL069757 · NHLBI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI KRAUSS, RONALD M · 2001 to 2009
$24.7M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Mehboob A Hussain · 2013 to 2026
$24.3M
Genome-Wide Association Analysis in Essential Hypertension (FEHGAS study)R01HL086694 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ARAVINDA CHAKRAVARTI · 2007 to 2026
$21.2M
Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D, TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
UCLA CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTEUL1RR033176 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2011 to 2011
$15.5M
AN NCRR CENTER FOR HIGH THROUGHPUT SNP GENOTYPING AND ANALYSIS: GAIN NETWORKU54RR020278 · NCRR · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY · 2004 to 2008
$14.4M
Cell Interactions in the Inflamed Intestinal MucosaR01DK075787 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI JOEL N HIRSCHHORN · 2007 to 2026
$13.1M
Epidemiology of Venous Thrombosis & Pulmonary EmbolismR01HL059367 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI TANG, WEIHONG · 1998 to 2024
$11.8M
Targeted Genetic Analysis of T2D and Quantitative TraitsR01DK072193 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAREN L. MOHLKE · 2005 to 2026
$11.3M
Cancer Research UK 14136Chief Scientist Office CZB/4/710Intramural NIH HHS Z01 HG000024Medical Research Council G0401527Medical Research Council G0601261Medical Research Council G1000143Medical Research Council MC_PC_U127561128Medical Research Council MC_U106179471Medical Research Council MC_U127561128NCI NIH HHS N01 CN015103NCRR NIH HHS U54 RR020278NCRR NIH HHS UL1 RR033176NHGRI NIH HHS N01 HG065403NHGRI NIH HHS R01 HG002651NHGRI NIH HHS U01 HG004402NHGRI NIH HHS U01 HG006513NHLBI NIH HHS HHSN268201100005CNHLBI NIH HHS HHSN268201100005GNHLBI NIH HHS HHSN268201100005INHLBI NIH HHS HHSN268201100006CNHLBI NIH HHS HHSN268201100007CNHLBI NIH HHS HHSN268201100007INHLBI NIH HHS HHSN268201100008CNHLBI NIH HHS HHSN268201100008INHLBI NIH HHS HHSN268201100009CNHLBI NIH HHS HHSN268201100009INHLBI NIH HHS HHSN268201100010CNHLBI NIH HHS HHSN268201100011CNHLBI NIH HHS HHSN268201100011INHLBI NIH HHS HHSN268201100012CNHLBI NIH HHS N01 HC015103NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01 HC035129NHLBI NIH HHS N01 HC045133NHLBI NIH HHS N01 HC055222NHLBI NIH HHS N01 HC075150NHLBI NIH HHS N01 HC085079NHLBI NIH HHS N01 HC085086NHLBI NIH HHS N02 HL064278NHLBI NIH HHS R01 HL043851NHLBI NIH HHS R01 HL059367NHLBI NIH HHS R01 HL075366NHLBI NIH HHS R01 HL080295NHLBI NIH HHS R01 HL086694NHLBI NIH HHS R01 HL087641NHLBI NIH HHS R01 HL087647NHLBI NIH HHS R01 HL087652NHLBI NIH HHS R01 HL087676NHLBI NIH HHS R01 HL087679NHLBI NIH HHS R01 HL105756NHLBI NIH HHS U01 HL054527NHLBI NIH HHS U01 HL069757NHLBI NIH HHS U01 HL072515NHLBI NIH HHS U01 HL084729NHLBI NIH HHS U01 HL084756NIAAA NIH HHS AA014041NIAAA NIH HHS AA10248NIAAA NIH HHS AA13320NIAAA NIH HHS AA13321NIAAA NIH HHS AA13326NIAAA NIH HHS K05 AA017688NIAAA NIH HHS R01 AA007535NIAAA NIH HHS R01 AA013320NIAAA NIH HHS R01 AA013321NIAAA NIH HHS R01 AA013326NIAAA NIH HHS R01 AA014041NIAMS NIH HHS F32 AR059469NIA NIH HHS N01 AG012100NIA NIH HHS R01 AG015928NIA NIH HHS R01 AG020098NIA NIH HHS R01 AG023629NIA NIH HHS R01 AG027058NIDA NIH HHS DA12854NIDA NIH HHS R01 DA012854NIDA NIH HHS R56 DA012854NIDDK NIH HHS F32 DK079466NIDDK NIH HHS K23 DK080145NIDDK NIH HHS P30 DK020572NIDDK NIH HHS P30 DK063491NIDDK NIH HHS P30 DK072488NIDDK NIH HHS R01 DK062370NIDDK NIH HHS R01 DK072193NIDDK NIH HHS R01 DK073490NIDDK NIH HHS R01 DK075681NIDDK NIH HHS R01 DK075787NIDDK NIH HHS U01 DK062418NIGMS NIH HHS GM057091NIMH NIH HHS R01 MH063706NIMH NIH HHS RL1 MH083268NLM NIH HHS R01 LM010098Wellcome Trust 090532
6 · The paper itself

Abstract

There is evidence across several species for genetic control of phenotypic variation of complex traits, such that the variance among phenotypes is genotype dependent. Understanding genetic control of variability is important in evolutionary biology, agricultural selection programmes and human medicine, yet for complex traits, no individual genetic variants associated with variance, as opposed to the mean, have been identified. Here we perform a meta-analysis of genome-wide association studies of phenotypic variation using ∼170,000 samples on height and body mass index (BMI) in human populations. We report evidence that the single nucleotide polymorphism (SNP) rs7202116 at the FTO gene locus, which is known to be associated with obesity (as measured by mean BMI for each rs7202116 genotype), is also associated with phenotypic variability. We show that the results are not due to scale effects or other artefacts, and find no other experiment-wise significant evidence for effects on variability, either at loci other than FTO for BMI or at any locus for height. The difference in variance for BMI among individuals with opposite homozygous genotypes at the FTO locus is approximately 7%, corresponding to a difference of ∼0.5 kilograms in the standard deviation of weight. Our results indicate that genetic variants can be discovered that are associated with variability, and that between-person variability in obesity can partly be explained by the genotype at the FTO locus. The results are consistent with reported FTO by environment interactions for BMI, possibly mediated by DNA methylation. Our BMI results for other SNPs and our height results for all SNPs suggest that most genetic variants, including those that influence mean height or mean BMI, are not associated with phenotypic variance, or that their effects on variability are too small to detect even with samples sizes greater than 100,000.

Indexed as

Body Mass IndexGenetic VariationPhenotypeAlpha-Ketoglutarate-Dependent Dioxygenase FTOBody HeightCo-Repressor ProteinsFemaleGenome-Wide Association StudyHumansMaleNerve Tissue ProteinsPolymorphism, Single NucleotideProteinsRepressor ProteinsAlpha-Ketoglutarate-Dependent Dioxygenase FTOCo-Repressor ProteinsFTO protein, humanNerve Tissue ProteinsProteinsRCOR1 protein, humanRepressor Proteins

Identifiers

PMID22982992
PMCPMC3564953
OpenAlexW2104382557

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.