Evidence map›Paper›PMID 22982374›Full record

ArticleMolecular & cellular proteomics : MCP2012

Quantitative proteomic analysis reveals that antioxidation mechanisms contribute to cold tolerance in plantain (Musa paradisiaca L.; ABB Group) seedlings.

Qiao-Song Yang, Jun-Hua Wu, Chun-Yu Li, Yue-Rong Wei, Ou Sheng, Chun-Hua Hu, Rui-Bin Kuang, Yong-Hong Huang, Xin-Xiang Peng, James A McCardle and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
10.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 114 citations in OpenAlex.

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  15. Physiological and Proteomic Responses of Mulberry Trees (International journal of molecular sciences · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Qiao-Song YangInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.
Jun-Hua Wu
Chun-Yu Li
Yue-Rong Wei
Ou Sheng
Chun-Hua Hu
Rui-Bin Kuang
Yong-Hong Huang
Xin-Xiang Peng
James A McCardle
Wei Chen
Yong Yang
Jocelyn K C Rose
Sheng Zhang
Gan-Jun Yi
Guangdong Academy of Agricultural Sciences · CNMinistry of Agriculture and Rural Affairs · CNCornell University · USSouth China Agricultural University · CNRobert W. Holley Center for Agriculture & Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Banana and its close relative, plantain are globally important crops and there is considerable interest in optimizing their cultivation. Plantain has superior cold tolerance compared with banana and a thorough understanding of the molecular mechanisms and responses of plantain to cold stress has great potential value for developing cold tolerant banana cultivars. In this study, we used iTRAQ-based comparative proteomic analysis to investigate the temporal responses of plantain to cold stress. Plantain seedlings were exposed for 0, 6, and 24 h of cold stress at 8 °C and subsequently allowed to recover for 24 h at 28 °C. A total of 3477 plantain proteins were identified, of which 809 showed differential expression from the three treatments. The majority of differentially expressed proteins were predicted to be involved in oxidation-reduction, including oxylipin biosynthesis, whereas others were associated with photosynthesis, photorespiration, and several primary metabolic processes, such as carbohydrate metabolic process and fatty acid beta-oxidation. Western blot analysis and enzyme activity assays were performed on seven differentially expressed, cold-response candidate plantain proteins to validate the proteomics data. Similar analyses of the seven candidate proteins were performed in cold-sensitive banana to examine possible functional conservation, and to compare the results to equivalent responses between the two species. Consistent results were achieved by Western blot and enzyme activity assays, demonstrating that the quantitative proteomics data collected in this study are reliable. Our results suggest that an increase of antioxidant capacity through adapted ROS scavenging capability, reduced production of ROS, and decreased lipid peroxidation contribute to molecular mechanisms for the increased cold tolerance in plantain. To the best of our knowledge, this is the first report of a global investigation on molecular responses of plantain to cold stress by proteomic analysis.

Indexed as

Cold TemperatureAntioxidantsCatalaseFree Radical ScavengersGene Expression RegulationMusaOxidation-ReductionOxylipinsPhotosynthesisPlant ProteinsProteomeReactive Oxygen SpeciesSeedlingsStress, PhysiologicalSuperoxide DismutaseAntioxidantsCatalaseFree Radical ScavengersOxylipinsPlant ProteinsProteomeReactive Oxygen SpeciesSuperoxide Dismutase

Identifiers

PMID22982374
PMCPMC3518116
OpenAlexW2144221634

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.