Evidence map›Paper›PMID 22982192›Full record

ReviewBiochimica et biophysica acta2013

Single-molecule studies of RNAPII elongation.

Jing Zhou, Volker Schweikhard, Steven M Block

Open access · greenAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Observing Single RNA Polymerase Molecules Down to Base-Pair Resolution.Methods in molecular biology (Clifton, N.J.) · 2017
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jing ZhouDepartment of Applied Physics, Stanford University, Stanford, CA 94305, USA.
Volker Schweikhard
Steven M Block
Stanford University · US

Funding

Nucleic Acid Enzymes and Nucleic Acids Studied at the Molecular LevelR37GM057035 · NIGMS · STANFORD UNIVERSITY · PI BLOCK, STEVEN M · 2010 to 2019
$5.7M
TRANSCRIPTION STUDIED AT THE MOLECULAR LEVELR01GM057035 · NIGMS · STANFORD UNIVERSITY · PI BLOCK, STEVEN M · 1997 to 2009
$3.3M
NIGMS NIH HHS R01 GM057035NIGMS NIH HHS R01-GM57035NIGMS NIH HHS R37 GM057035
6 · The paper itself

Abstract

Elongation, the transcriptional phase in which RNA polymerase (RNAP) moves processively along a DNA template, occurs via a fundamental enzymatic mechanism that is thought to be universally conserved among multi-subunit polymerases in all kingdoms of life. Beyond this basic mechanism, a multitude of processes are integrated into transcript elongation, among them fidelity control, gene regulatory interactions involving elongation factors, RNA splicing or processing factors, and regulatory mechanisms associated with chromatin structure. Many kinetic and molecular details of the mechanism of the nucleotide addition cycle and its regulation, however, remain elusive and generate continued interest and even controversy. Recently, single-molecule approaches have emerged as powerful tools for the study of transcription in eukaryotic organisms. Here, we review recent progress and discuss some of the unresolved questions and ongoing debates, while anticipating future developments in the field. This article is part of a Special Issue entitled: RNA Polymerase II Transcript Elongation.

Indexed as

AnimalsEukaryotic CellsHumansKineticsModels, BiologicalModels, MolecularMolecular Dynamics SimulationOptical TweezersRNA Polymerase IITranscription Elongation, GeneticRNA Polymerase II

Identifiers

PMID22982192
PMCPMC3544987
OpenAlexW2013568739

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.