Evidence map›Paper›PMID 22981770›Full record

ArticleCurrent biology : CB2012

SID-5 is an endosome-associated protein required for efficient systemic RNAi in C. elegans.

Andrea Hinas, Amanda J Wright, Craig P Hunter

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 120 citations in OpenAlex.

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  13. RNAi inFrontiers in plant science · 2022
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Andrea HinasDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA. andrea.hinas@imbim.uu.se
Amanda J Wright
Craig P Hunter
Harvard University · US

Funding

Molecular Genetic Analysis of Extracellular RNAs in C. ElegansR01GM089795 · NIGMS · HARVARD UNIVERSITY · PI HUNTER, CRAIG PATRICK · 2009 to 2021
$4.6M
NIGMS NIH HHS R01 GM089795
6 · The paper itself

Abstract

In the nematode C. elegans, RNAi silencing signals are efficiently taken up from the environment and transported between cells and tissues. Previous studies implicating endosomal proteins in systemic RNAi lack conclusive evidence. Here, we report the identification and characterization of SID-5, a C. elegans endosome-associated protein that is required for efficient systemic RNAi in response to both ingested and expressed double-stranded RNA (dsRNA). SID-5 is detected in cytoplasmic foci that partially colocalize with GFP fusions of late endosomal proteins RAB-7 and LMP-1. Furthermore, knockdown of various endosomal proteins similarly relocalizes both SID-5 and LMP-1::GFP. Consistent with a non-cell-autonomous function, intestine-specific SID-5 expression restored body wall muscle (bwm) target gene silencing in response to ingested dsRNA. Finally, we show that sid-5 is required for the previously described sid-1-independent transport of ingested RNAi triggers across the intestine. Together, these data demonstrate that an endosome-associated protein, SID-5, promotes the transport of RNAi silencing signals between cells. Furthermore, SID-5 acts differently than the previously described SID-1, SID-2, and SID-3 proteins, thus expanding the systemic RNAi pathway.

Indexed as

RNA InterferenceAnimalsBiological TransportCaenorhabditis elegansCaenorhabditis elegans ProteinsDNAEndosomesGreen Fluorescent ProteinsIntestinal MucosaMembrane Glycoproteinsrab7 GTP-Binding Proteinsrab GTP-Binding ProteinsRNA, Double-StrandedRNA, Small CytoplasmicSequence DeletionCaenorhabditis elegans ProteinsDNAGreen Fluorescent ProteinsLMP-1 protein, C elegansMembrane Glycoproteinsrab7 GTP-Binding Proteinsrab GTP-Binding ProteinsRNA, Double-StrandedRNA, Small Cytoplasmic

Identifiers

PMID22981770
PMCPMC10518204
OpenAlexW2029675711

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.