Evidence map›Paper›PMID 22980502›Full record

ArticleVirology2012

Assembly of bacteriophage 80α capsids in a Staphylococcus aureus expression system.

Michael S Spilman, Priyadarshan K Damle, Altaira D Dearborn, Cynthia M Rodenburg, Jenny R Chang, Erin A Wall, Gail E Christie, Terje Dokland

Abstract read
In one paragraph

Article in Virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Formation and role of the portal ofbioRxiv : the preprint server for biology · 2026
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  3. AeLife · 2024
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  5. AbioRxiv : the preprint server for biology · 2023
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  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Convergent evolution of pathogenicity islands in helper cos phage interference.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Michael S SpilmanDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, USA.
Priyadarshan K Damle
Altaira D Dearborn
Cynthia M Rodenburg
Jenny R Chang
Erin A Wall
Gail E Christie
Terje Dokland
University of Alabama at Birmingham · USVirginia Commonwealth University · US

Funding

Structural basis for pathogenicity island mobilization in S. aureusR01AI083255 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DOKLAND, TERJE · 2009 to 2023
$5.6M
Helper phage mobilization of S. aureus superantigen pathogenicity islandsR56AI081837 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHRISTIE, GAIL E · 2010 to 2010
$372k
NIAID NIH HHS R01 AI083255NIAID NIH HHS R01AI083255NIAID NIH HHS R56 AI081837NIAID NIH HHS R56AI081837
6 · The paper itself

Abstract

80α is a temperate, double-stranded DNA bacteriophage of Staphylococcus aureus that can act as a "helper" for the mobilization of S. aureus pathogenicity islands (SaPIs), including SaPI1. When SaPI1 is mobilized by 80α, the SaPI genomes are packaged into capsids that are composed of phage proteins, but that are smaller than those normally formed by the phage. This size determination is dependent on SaPI1 proteins CpmA and CpmB. Here, we show that co-expression of the 80α capsid and scaffolding proteins in S. aureus, but not in E. coli, leads to the formation of procapsid-related structures, suggesting that a host co-factor is required for assembly. The capsid and scaffolding proteins also undergo normal N-terminal processing upon expression in S. aureus, implicating a host protease. We also find that SaPI1 proteins CpmA and CpmB promote the formation of small capsids upon co-expression with 80α capsid and scaffolding proteins in S. aureus.

Indexed as

Virus AssemblyBacterial ProteinsCapsidEscherichia coliGene ExpressionGenetics, MicrobialGenomic IslandsHumansMolecular BiologyProtein MultimerizationStaphylococcus aureusStaphylococcus PhagesVirologyBacterial Proteins

Identifiers

PMID22980502
PMCPMC3518739
OpenAlexW2028986127

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.