Evidence map›Paper›PMID 22977255›Full record

ArticleThe Journal of biological chemistry2012

Global identification of new substrates for the yeast endoribonuclease, RNase mitochondrial RNA processing (MRP).

Jason Aulds, Sara Wierzbicki, Adrian McNairn, Mark E Schmitt

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jason AuldsDepartment of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, Syracuse, New York 13210, USA.
Sara Wierzbicki
Adrian McNairn
Mark E Schmitt
SUNY Upstate Medical University · US

Funding

Control of the cell cycle by mRNA degradation.R01GM063798 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI SCHMITT, MARK E · 2003 to 2011
$2.3M
NIGMS NIH HHS GM063798NIGMS NIH HHS R01 GM063798
6 · The paper itself

Abstract

RNase mitochondrial RNA processing (MRP) is an essential, evolutionarily conserved endoribonuclease composed of 10 different protein subunits and a single RNA. RNase MRP has established roles in multiple pathways including ribosome biogenesis, cell cycle regulation, and mitochondrial DNA replication. Although each of these functions is important to cell growth, additional functions may exist given the essential nature of the complex. To identify novel RNase MRP substrates, we utilized RNA immunoprecipitation and microarray chip analysis to identify RNA that physically associates with RNase MRP. We identified several new potential substrates for RNase MRP including a cell cycle-regulated transcript, CTS1; the yeast homolog of the mammalian p27(Kip1), SIC1; and the U2 RNA component of the spliceosome. In addition, we found RNase MRP to be involved in the regulation of the Ty1 transposon RNA. These results reinforce and broaden the role of RNase MRP in cell cycle regulation and help to identify new roles of this endoribonuclease.

Indexed as

ChitinasesCyclin-Dependent Kinase Inhibitor ProteinsEndoribonucleasesGenes, FungalMutationOligonucleotide Array Sequence AnalysisProtein BindingRibosomal ProteinsRNA, FungalRNA, MessengerRNA Processing, Post-TranscriptionalRNA StabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsChitinasesCTS1 protein, S cerevisiaeCyclin-Dependent Kinase Inhibitor ProteinsEndoribonucleasesGTS1 protein, S cerevisiaemitochondrial RNA-processing endoribonucleaseRibosomal ProteinsRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsSIC1 protein, S cerevisiaeTranscription Factors

Identifiers

PMID22977255
PMCPMC3481309
OpenAlexW2086904093

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.