Evidence map›Paper›PMID 22977173›Full record

ArticleNucleic acids research2012

Distinct roles for DNA-PK, ATM and ATR in RPA phosphorylation and checkpoint activation in response to replication stress.

Shengqin Liu, Stephen O Opiyo, Karoline Manthey, Jason G Glanzer, Amanda K Ashley, Courtney Amerin, Kyle Troksa, Meena Shrivastav, Jac A Nickoloff, Greg G Oakley

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 157 papers.

0numbers the graph read from it
0cells of the map it votes in
157citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

157 citing papers in PubMed, 260 citations in OpenAlex.

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97 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Shengqin LiuDepartment of Oral Biology, University of Nebraska Medical Center, Omaha, NE 68583, USA.
Stephen O Opiyo
Karoline Manthey
Jason G Glanzer
Amanda K Ashley
Courtney Amerin
Kyle Troksa
Meena Shrivastav
Jac A Nickoloff
Greg G Oakley
Colorado State University · USUniversity of Nebraska Medical Center · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
SUPPRESSIVE ROLE OF TGFBETA IN METASTASIS OF COLON CANCERP20RR018759 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI JOHNSON, KEITH R · 2003 to 2011
$17.9M
METNASE ROLES IN NHEJ, DNA INTEGRATION AND TRANSLOCATIONR01GM084020 · NIGMS · COLORADO STATE UNIVERSITY · PI NICKOLOFF, JAC A · 2009 to 2016
$2.4M
DSB REPAIR RECOMBINATION, AND GENOME STABILITYR01CA100862 · NCI · UNIVERSITY OF NEW MEXICO · PI OSLEY, MARY ANN · 2004 to 2008
$1.4M
NCI NIH HHS P30 CA046934NCI NIH HHS R01 CA100862NCRR NIH HHS P20RR018759-08NIGMS NIH HHS R01 GM084020
6 · The paper itself

Abstract

DNA damage encountered by DNA replication forks poses risks of genome destabilization, a precursor to carcinogenesis. Damage checkpoint systems cause cell cycle arrest, promote repair and induce programed cell death when damage is severe. Checkpoints are critical parts of the DNA damage response network that act to suppress cancer. DNA damage and perturbation of replication machinery causes replication stress, characterized by accumulation of single-stranded DNA bound by replication protein A (RPA), which triggers activation of ataxia telangiectasia and Rad3 related (ATR) and phosphorylation of the RPA32, subunit of RPA, leading to Chk1 activation and arrest. DNA-dependent protein kinase catalytic subunit (DNA-PKcs) [a kinase related to ataxia telangiectasia mutated (ATM) and ATR] has well characterized roles in DNA double-strand break repair, but poorly understood roles in replication stress-induced RPA phosphorylation. We show that DNA-PKcs mutant cells fail to arrest replication following stress, and mutations in RPA32 phosphorylation sites targeted by DNA-PKcs increase the proportion of cells in mitosis, impair ATR signaling to Chk1 and confer a G2/M arrest defect. Inhibition of ATR and DNA-PK (but not ATM), mimic the defects observed in cells expressing mutant RPA32. Cells expressing mutant RPA32 or DNA-PKcs show sustained H2AX phosphorylation in response to replication stress that persists in cells entering mitosis, indicating inappropriate mitotic entry with unrepaired damage.

Indexed as

DNA ReplicationAnimalsAtaxia Telangiectasia Mutated ProteinsCell Cycle CheckpointsCell Cycle ProteinsCheckpoint Kinase 1CHO CellsCricetinaeCricetulusDNA-Activated Protein KinaseDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA RepairHumansMitosisMutationAtaxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsCheckpoint Kinase 1CHEK1 protein, humanDNA-Activated Protein KinaseDNA-Binding ProteinsProtein KinasesProtein Serine-Threonine KinasesReplication Protein ASerineTumor Suppressor Proteins

Identifiers

PMID22977173
PMCPMC3510507
OpenAlexW2050104597

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.