Evidence map›Paper›PMID 22973513›Full record

ArticleInternational journal of nephrology2012

Variation in APOL1 Contributes to Ancestry-Level Differences in HDLc-Kidney Function Association.

Amy Rebecca Bentley, Ayo P Doumatey, Guanjie Chen, Hanxia Huang, Jie Zhou, Daniel Shriner, Congqing Jiang, Zhenjian Zhang, Guozheng Liu, Olufemi Fasanmade and 12 more

Open access · goldAbstract read
In one paragraph

Article in International journal of nephrology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 29 citations in OpenAlex.

  1. Examination of Potential Modifiers of the Association of APOL1 Alleles with CKD Progression.Clinical journal of the American Society of Nephrology : CJASN · 2015
    Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Apolipoprotein L1 and Kidney Disease in African Americans.Trends in endocrinology and metabolism: TEM · 2016
    Review
  8. APOL1 Genotype, Kidney and Cardiovascular Disease, and Death in Older Adults.Arteriosclerosis, thrombosis, and vascular biology · 2016
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Insulin signaling: implications for podocyte biology in diabetic kidney disease.Current opinion in nephrology and hypertension · 2015
    Article
  14. Review
  15. Article
  16. Evolution of the primate trypanolytic factor APOL1.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 8 institutions in 4 countries.

Amy Rebecca BentleyCenter for Research on Genomics and Global Health, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892-5635, USA.
Ayo P Doumatey
Guanjie Chen
Hanxia Huang
Jie Zhou
Daniel Shriner
Congqing Jiang
Zhenjian Zhang
Guozheng Liu
Olufemi Fasanmade
Thomas Johnson
Johnnie Oli
Godfrey Okafor
Benjamin A Eghan
Kofi Agyenim-Boateng
Jokotade Adeleye
Williams Balogun
Clement Adebamowo
Albert Amoah
Joseph Acheampong
Adebowale Adeyemo
Charles N Rotimi
National Human Genome Research Institute · USKwame Nkrumah University of Science and Technology · GHSuizhou Central Hospital · CNUniversity of Ibadan · NGNational Institutes of Health · USUniversity of Lagos · NGUniversity of Nigeria Teaching Hospital · NGUniversity of Ghana · GH

Funding

Genetic epidemiology of complex diseasesZIAHG200362 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ROTIMI, CHARLES · 2009 to 2025
$54.7M
UVDM01RR010284 · NCRR · HOWARD UNIVERSITY · PI TAYLOR, WILLIAM ROBERT · 1996 to 2010
$17.4M
Understanding Obesity In Relation to the Built EnvironmentP20MD006899 · NIMHD · JACKSON STATE UNIVERSITY · PI ADDISON, CLIFTON · 2012 to 2016
$5.3M
Genetic epidemiology of complex diseasesZ01HG200362 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ROTIMI, CHARLES · 2008 to 2008
$1.7M
Training Program in Nigeria for NCD Research (TRAPING - NCD)D43TW009106 · FIC · UNIVERSITY OF MARYLAND BALTIMORE · PI ADEBAMOWO, CLEMENT ADEBAYO · 2011 to 2015
$1.1M
FIC NIH HHS D43 TW009106Intramural NIH HHS Z01 HG200362NCRR NIH HHS M01 RR010284NIMHD NIH HHS P20 MD006899
6 · The paper itself

Abstract

Low levels of high-density cholesterol (HDLc) accompany chronic kidney disease, but the association between HDLc and the estimated glomerular filtration rate (eGFR) in the general population is unclear. We investigated the HDLc-eGFR association in nondiabetic Han Chinese (HC, n = 1100), West Africans (WA, n = 1497), and African Americans (AA, n = 1539). There were significant differences by ancestry: HDLc was positively associated with eGFR in HC (β = 0.13, P < 0.0001), but negatively associated among African ancestry populations (WA: -0.19, P < 0.0001; AA: -0.09, P = 0.02). These differences were also seen in nationally-representative NHANES data (among European Americans: 0.09, P = 0.005; among African Americans -0.14, P = 0.03). To further explore the findings in African ancestry populations, we investigated the role of an African ancestry-specific nephropathy risk variant, rs73885319, in the gene encoding HDL-associated APOL1. Among AA, an inverse HDLc-eGFR association was observed only with the risk genotype (-0.38 versus 0.001; P = 0.03). This interaction was not seen in WA. In summary, counter to expectation, an inverse HDLc-eGFR association was observed among those of African ancestry. Given the APOL1 × HDLc interaction among AA, genetic factors may contribute to this paradoxical association. Notably, these findings suggest that the unexplained mechanism by which APOL1 affects kidney-disease risk may involve HDLc.

Identifiers

PMID22973513
PMCPMC3438781
OpenAlexW2100187907

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.