Evidence map›Paper›PMID 22972982›Full record

ArticleBlood2012

A GWAS sequence variant for platelet volume marks an alternative DNM3 promoter in megakaryocytes near a MEIS1 binding site.

Sylvia T Nürnberg, Augusto Rendon, Peter A Smethurst, Dirk S Paul, Katrin Voss, Jonathan N Thon, Heather Lloyd-Jones, Jennifer G Sambrook, Marloes R Tijssen, HaemGen Consortium and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 2 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 2 syntheses or guidelines pooled it, 50 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Multimodal analysis ofbioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Sylvia T NürnbergDepartment of Haematology, University of Cambridge and National Health Service Blood and Transplant, Cambridge, United Kingdom.
Augusto Rendon
Peter A Smethurst
Dirk S Paul
Katrin Voss
Jonathan N Thon
Heather Lloyd-Jones
Jennifer G Sambrook
Marloes R Tijssen
HaemGen Consortium
Joseph E Italiano
Panos Deloukas
Berthold Gottgens
Nicole Soranzo
Willem H Ouwehand
University of Cambridge · GBWellcome Sanger Institute · GBBoston Children's Hospital · USHarvard University · USMedical Research Council · GBNational Health Service · GB

Funding

Cytoskeletal Mechanisms of Platelet FormationR01HL068130 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI ITALIANO, JOSEPH E · 2001 to 2021
$8.1M
Austrian Science Fund FWF I 434British Heart Foundation RG/08/014/24067British Heart Foundation RG/09/012/28096British Heart Foundation RG/09/12/28096Cancer Research UK 12765Cancer Research UK 14136Department of Health RP-PG-0310-1002Medical Research Council G0401527Medical Research Council G0800784Medical Research Council G1000143Medical Research Council MC_PC_12009National Centre for the Replacement, Refinement and Reduction of Animals in Research G0900729/1NHLBI NIH HHS HL68130NHLBI NIH HHS R01 HL068130Wellcome TrustWellcome Trust WT-084183/2/07/2
6 · The paper itself

Abstract

We recently identified 68 genomic loci where common sequence variants are associated with platelet count and volume. Platelets are formed in the bone marrow by megakaryocytes, which are derived from hematopoietic stem cells by a process mainly controlled by transcription factors. The homeobox transcription factor MEIS1 is uniquely transcribed in megakaryocytes and not in the other lineage-committed blood cells. By ChIP-seq, we show that 5 of the 68 loci pinpoint a MEIS1 binding event within a group of 252 MK-overexpressed genes. In one such locus in DNM3, regulating platelet volume, the MEIS1 binding site falls within a region acting as an alternative promoter that is solely used in megakaryocytes, where allelic variation dictates different levels of a shorter transcript. The importance of dynamin activity to the latter stages of thrombopoiesis was confirmed by the observation that the inhibitor Dynasore reduced murine proplatelet for-mation in vitro.

Indexed as

AnimalsBinding SitesBlood PlateletsCell LineageCell Line, TumorCells, CulturedChromatin ImmunoprecipitationDynamin IIIGene ExpressionGenetic VariationGenome, HumanHomeodomain ProteinsHumansHydrazonesMegakaryocytesMiceDynamin IIIHomeodomain ProteinsHydrazonesMEIS1 protein, humanMeis1 protein, mouseMyeloid Ecotropic Viral Integration Site 1 ProteinN'-(3,4-dihydroxybenzylidene)-3-hydroxy-2-naphthahydrazideNeoplasm Proteins

Identifiers

PMID22972982
PMCPMC3520622
OpenAlexW2065695399

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.