Evidence map›Paper›PMID 22972924›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2012

IFN-α and lipopolysaccharide upregulate APOBEC3 mRNA through different signaling pathways.

Harshini V Mehta, Philip H Jones, Jerrold P Weiss, Chioma M Okeoma

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Harshini V MehtaDepartment of Microbiology, Carver College of Medicine, University of Iowa, Iowa City, IA 52242, USA.
Philip H Jones
Jerrold P Weiss
Chioma M Okeoma
University of Iowa · US

Funding

Regulation of MD-2 function and expressionR01AI059372 · NIAID · UNIVERSITY OF IOWA · PI WEISS, JERROLD P · 2004 to 2013
$3.6M
Role of cytokine induction in APOBEC3-mediated virus restrictionK22AI081899 · NIAID · UNIVERSITY OF IOWA · PI OKEOMA, CHIOMA M · 2010 to 2011
$270k
NIAID NIH HHS K22 AI081899NIAID NIH HHS K22 AI 81899-01NIAID NIH HHS R01 AI059372
6 · The paper itself

Abstract

APOBEC3 (A3) proteins are virus-restriction factors that provide intrinsic immunity against infections by viruses like HIV-1 and mouse mammary tumor virus. A3 proteins are inducible by inflammatory stimuli, such as LPS and IFN-α, via mechanisms that are not fully defined. Using genetic and pharmacological studies on C57BL/6 mice and cells, we show that IFN-α and LPS induce A3 via different pathways, independently of each other. IFN-α positively regulates mouse APOBEC3 (mA3) mRNA expression through IFN-αR/PKC/STAT1 and negatively regulates mA3 mRNA expression via IFN-αR/MAPKs-signaling pathways. Interestingly, LPS shows some variation in its regulatory behavior. Although LPS-mediated positive regulation of mA3 mRNA occurs through TLR4/TRIF/IRF3/PKC, it negatively modulates mA3 mRNA via TLR4/MyD88/MAPK-signaling pathways. Additional studies on human peripheral blood mononuclear cells reveal that PKC differentially regulates IFN-α and LPS induction of human A3A, A3F, and A3G mRNA expression. In summary, we identified important signaling targets downstream of IFN-αR and TLR4 that mediate A3 mRNA induction by both LPS and IFN-α. Our results provide new insights into the signaling targets that could be manipulated to enhance the intracellular store of A3 and potentially enhance A3 antiviral function in the host.

Indexed as

AnimalsCell LineCell Line, TransformedCytidine DeaminaseDendritic CellsHIV-1HumansInflammation MediatorsInterferon-alphaIntracellular FluidLipopolysaccharidesMacrophagesMiceMice, Inbred C57BLMice, KnockoutRNA, MessengerApobec3 protein, mouseCytidine DeaminaseInflammation MediatorsInterferon-alphaLipopolysaccharidesRNA, Messenger

Identifiers

PMID22972924
PMCPMC3531240
OpenAlexW2161190844

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.