Evidence map›Paper›PMID 22970700›Full record

ArticleBiochemistry2012

Distinct sites within the vascular cell adhesion molecule-1 (VCAM-1) cytoplasmic domain regulate VCAM-1 activation of calcium fluxes versus Rac1 during leukocyte transendothelial migration.

Michelle E Marchese, Sergejs Berdnikovs, Joan M Cook-Mills

Abstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

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  17. Integrins in T Cell Physiology.International journal of molecular sciences · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Michelle E MarcheseDivision of Allergy and Immunology, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Sergejs Berdnikovs
Joan M Cook-Mills
Northwestern University · US

Funding

Forms of Vitamin E Have Opposing Effects on InflammationR01AT004837 · NCCIH · NORTHWESTERN UNIVERSITY AT CHICAGO · PI COOK-MILLS, JOAN M · 2008 to 2011
$1.5M
gp91 phox Function in VCAM-1-dependent Lung EosinophiliaR01HL069428 · NHLBI · UNIVERSITY OF CINCINNATI · PI COOK-MILLS, JOAN M · 2005 to 2008
$1.3M
NCCIH NIH HHS R01 AT004837NHLBI NIH HHS R01 HL069428NHLBI NIH HHS R01 HL69428
6 · The paper itself

Abstract

Vascular adhesion molecules regulate the migration of leukocytes from the blood into tissue during inflammation. Binding of leukocytes to vascular cell adhesion molecule-1 (VCAM-1) activates signals in endothelial cells, including Rac1 and calcium fluxes. These VCAM-1 signals are required for leukocyte transendothelial migration on VCAM-1. However, it has not been reported whether the cytoplasmic domain of VCAM-1 is necessary for these signals. Interestingly, the 19-amino acid sequence of the VCAM-1 cytoplasmic domain is 100% conserved among many mammalian species, suggesting an important functional role for the domain. To examine the function of the VCAM-1 cytoplasmic domain, we deleted the VCAM-1 cytoplasmic domain or mutated the cytoplasmic domain at amino acid N724, S728, Y729, S730, or S737. The cytoplasmic domain and S728, Y729, S730, or S737 were necessary for leukocyte transendothelial migration. S728 and Y729, but not S730 or S737, were necessary for VCAM-1 activation of calcium fluxes. In contrast, S730 and S737, but not S728 or Y729, were necessary for VCAM-1 activation of Rac1. These functional data are consistent with our computational model of the structure of the VCAM-1 cytoplasmic domain as an α-helix with S728 and Y729, and S730 and S737, on opposite sides of the α-helix. Together, these data indicate that S728 and Y729, and S730 and S737, are distinct functional sites that coordinate VCAM-1 activation of calcium fluxes and Rac1 during leukocyte transendothelial migration.

Indexed as

Cell MovementAmino Acid SequenceAnimalsBase SequenceBinding SitesCalciumCell AdhesionCells, CulturedCytoplasmDNA PrimersEndotheliumLeukocytesMaleMiceMice, Inbred BALB CMolecular Sequence DataCalciumDNA Primersrac1 GTP-Binding ProteinVascular Cell Adhesion Molecule-1

Identifiers

PMID22970700
PMCPMC3558628
OpenAlexW1996832259

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.