Evidence map›Paper›PMID 22970112›Full record

ArticlePloS one2012

Microbial diversity and potential pathogens in ornamental fish aquarium water.

Katherine F Smith, Victor Schmidt, Gail E Rosen, Linda Amaral-Zettler

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Genome-Resolved Co-Infection byMicroorganisms · 2025
    Article
  6. Article
  7. Article
  8. ComammoxApplied and environmental microbiology · 2024
    Article
  9. Article
  10. Article
  11. Characterization ofMicroorganisms · 2024
    Article
  12. Article
  13. The Effect of Substrate on Water Quality in Ornamental Fish Tanks.Animals : an open access journal from MDPI · 2022
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. 16S rRNA-Based metagenomic analysis of microbial communities associated with wildBiotechnology reports (Amsterdam, Netherlands) · 2019
    Article
  19. Microbiome Dynamics in a Large Artificial Seawater Aquarium.Applied and environmental microbiology · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Katherine F SmithDepartment of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America.
Victor Schmidt
Gail E Rosen
Linda Amaral-Zettler
Brown University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ornamental fishes are among the most popular and fastest growing categories of pets in the United States (U.S.). The global scope and scale of the ornamental fish trade and growing popularity of pet fish in the U.S. are strong indicators of the myriad economic and social benefits the pet industry provides. Relatively little is known about the microbial communities associated with these ornamental fishes or the aquarium water in which they are transported and housed. Using conventional molecular approaches and next generation high-throughput amplicon sequencing of 16S ribosomal RNA gene hypervariable regions, we characterized the bacterial community of aquarium water containing common goldfish (Carassius auratus) and Chinese algae eaters (Gyrinocheilus aymonieri) purchased from seven pet/aquarium shops in Rhode Island and identified the presence of potential pathogens. Our survey identified a total of 30 phyla, the most common being Proteobacteria (52%), Bacteroidetes (18%) and Planctomycetes (6%), with the top four phyla representing >80% of all sequences. Sequences from our water samples were most closely related to eleven bacterial species that have the potential to cause disease in fishes, humans and other species: Coxiella burnetii, Flavobacterium columnare, Legionella birminghamensis, L. pneumophila, Vibrio cholerae, V. mimicus. V. vulnificus, Aeromonas schubertii, A. veronii, A. hydrophila and Plesiomonas shigelloides. Our results, combined with evidence from the literature, suggest aquarium tank water harboring ornamental fish are an understudied source for novel microbial communities and pathogens that pose potential risks to the pet industry, fishes in trade, humans and other species.

Indexed as

BiodiversityWater MicrobiologyAnimalsBacteriaCloning, MolecularFishesGoldfishMolecular Sequence DataPetsPhylogenyPolymerase Chain ReactionRhode IslandSpecies Specificity

Identifiers

PMID22970112
PMCPMC3435374
OpenAlexW2031738466

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.