Evidence map›Paper›PMID 22969361›Full record

ArticleSensors (Basel, Switzerland)2012

Detection of miRNA in cell cultures by using microchip electrophoresis with a fluorescence-labeled riboprobe.

Shohei Yamamura, Shouki Yatsushiro, Yuka Yamaguchi, Kaori Abe, Yasuo Shinohara, Masatoshi Kataoka

Open access · goldAbstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Multiplex MicroRNA Detection on a Surface-Functionalized Power-Free Microfluidic Chip.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2021
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Shohei YamamuraHealth Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Takamatsu, Kagawa, Japan. yamamura-s@aist.go.jp
Shouki Yatsushiro
Yuka Yamaguchi
Kaori Abe
Yasuo Shinohara
Masatoshi Kataoka
National Institute of Advanced Industrial Science and Technology · JPTokushima University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The analysis of a microRNA (miRNA), miR-222 isolated from the PC12 cell line, was performed by use of the ribonuclease (RNase) protection assay, cyanine 5 (Cy5)-labeled miR-222 riboprobe, and a Hitachi SV1210 microchip electrophoresis system, which can be used to evaluate the integrity of total RNA. The fluorescence intensity corresponding to the protected RNA fragment increased in a dose-dependent manner with respect to the complementary-strand RNA. More highly sensitive detection of miRNA by microchip electrophoresis than by conventional method using fluorescence-labeled riboprobe could be obtained in 180 s. An obvious increase in miR-222 expression induced by nerve growth factor in PC12 cells could be observed. These results clearly indicate the potential of microchip electrophoresis for the analysis of miRNA using RNase protection assay with a fluorescence-labeled riboprobe.

Indexed as

Staining and LabelingAnimalsCarbocyaninesElectrophoresis, MicrochipEquipment DesignFluorescent DyesGene Expression RegulationMicroRNAsNerve Growth FactorPC12 CellsRatsReproducibility of ResultsRibonucleasesRNA ProbesRNA, Ribosomal, 18SRNA, Ribosomal, 28SCarbocyaninescyanine dye 5Fluorescent DyesMicroRNAsNerve Growth FactorRibonucleasesRNA ProbesRNA, Ribosomal, 18SRNA, Ribosomal, 28Smicrochip electrophoresismicroRNARNase protection assay

Identifiers

PMID22969361
PMCPMC3435990
OpenAlexW2041942971

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.