Evidence map›Paper›PMID 22968419›Full record

ArticleJournal of laboratory automation2013

High-throughput secondary screening at the single-cell level.

J Paul Robinson, Valery Patsekin, Cheryl Holdman, Kathy Ragheb, Jennifer Sturgis, Ray Fatig, Larisa V Avramova, Bartek Rajwa, V Jo Davisson, Nicole Lewis and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of laboratory automation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Flow Cytometry: Impact on Early Drug Discovery.Journal of biomolecular screening · 2015
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

J Paul RobinsonPurdue University Cytometry Laboratories, Department of Basic Medical Sciences, Purdue University, West Lafayette, IN 47907, USA. jpr@flowcyt.cyto.purdue.edu
Valery Patsekin
Cheryl Holdman
Kathy Ragheb
Jennifer Sturgis
Ray Fatig
Larisa V Avramova
Bartek Rajwa
V Jo Davisson
Nicole Lewis
Padma Narayanan
Nianyu Li
C W Qualls
Purdue University West Lafayette · USAmgen (United States) · US

Funding

A distributed clinical & biodefense national network for rapid organism identificR56AI089511 · NIAID · PURDUE UNIVERSITY · PI BHUNIA, ARUN K, ROBINSON, JOSEPH PAUL · 2010 to 2010
$1.3M
Specific Detection of Cervical Cancers Using Cytometry-Based Molecular DiagnosticR33CA140084 · NCI · PURDUE UNIVERSITY · PI DAVISSON, VINCENT JO, ROBINSON, JOSEPH PAUL · 2010 to 2012
$1.3M
NCI NIH HHS 1R33CA140084-01NCI NIH HHS R33 CA140084NIAID NIH HHS 1R56AI089511-01NIAID NIH HHS R56 AI089511
6 · The paper itself

Abstract

We have developed an automated system for drug screening using a single-cell-multiple functional response technology. The approach uses a semiautomated preparatory system, high-speed sample collection, and a unique analytical tool that provides instantaneous results for compound dilutions using 384-well plates. The combination of automation and rapid robotic sampling increases quality control and robustness. High-speed flow cytometry is used to collect single-cell results together with a newly defined analytical tool for extraction of IC(50) curves for multiple assays per cell. The principal advantage is the extreme speed of sample collection, with results from a 384-well plate being completed for both collection and data processing in less than 10 min. Using this approach, it is possible to extract detailed drug response information in a highly controlled fashion. The data are based on single-cell results, not populations. With simultaneous assays for different functions, it is possible to gain a more detailed understanding of each drug/compound interaction. Combined with integrated advanced data processing directly from raw data files, the process from sampling to analytical results is highly intuitive. Direct PubMed links allow review of drug structure and comparisons with similar compounds.

Indexed as

AutomationDrug Evaluation, PreclinicalFlow CytometryHigh-Throughput Screening AssaysHL-60 CellsHumansInhibitory Concentration 50MitochondriaSingle-Cell AnalysisTime Factors

Identifiers

PMID22968419
PMCPMC4380503
OpenAlexW2131261413

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.