Evidence map›Paper›PMID 22968171›Full record

ArticleThe EMBO journal2012

A complex immunodeficiency is based on U1 snRNP-mediated poly(A) site suppression.

Jörg Langemeier, Eva-Maria Schrom, Alona Rabner, Maximilian Radtke, Daniela Zychlinski, Anna Saborowski, Georg Bohn, Yael Mandel-Gutfreund, Jochen Bodem, Christoph Klein and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Let It Go: HIV-1Journal of virology · 2021
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  10. Lysosome: The metabolic signaling hub.Traffic (Copenhagen, Denmark) · 2019
    Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 4 countries.

Jörg LangemeierCell and Virus Genetics Group, Institute for Virology, Hannover Medical School, Hannover, Germany.
Eva-Maria Schrom
Alona Rabner
Maximilian Radtke
Daniela Zychlinski
Anna Saborowski
Georg Bohn
Yael Mandel-Gutfreund
Jochen Bodem
Christoph Klein
Jens Bohne
Medizinische Hochschule Hannover · DETechnion – Israel Institute of Technology · ILUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biallelic mutations in the untranslated regions (UTRs) of mRNAs are rare causes for monogenetic diseases whose mechanisms remain poorly understood. We investigated a 3'UTR mutation resulting in a complex immunodeficiency syndrome caused by decreased mRNA levels of p14/robld3 by a previously unknown mechanism. Here, we show that the mutation creates a functional 5' splice site (SS) and that its recognition by the spliceosomal component U1 snRNP causes p14 mRNA suppression in the absence of splicing. Histone processing signals are able to rescue p14 expression. Therefore, the mutation interferes only with canonical poly(A)-site 3' end processing. Our data suggest that U1 snRNP inhibits cleavage or poly(A) site recognition. This is the first description of a 3'UTR mutation that creates a functional 5'SS causative of a monogenetic disease. Moreover, our data endorse the recently described role of U1 snRNP in suppression of intronic poly(A) sites, which is here deleterious for p14 mRNA biogenesis.

Indexed as

3' Untranslated RegionsAdaptor Proteins, Signal TransducingAnimalsBase SequenceConserved SequenceEndosomesGene Expression RegulationGenes, ReporterHistonesHumansImmunologic Deficiency SyndromesIntronsMammalsMolecular Sequence DataMorpholinosNeutropenia3' Untranslated RegionsAdaptor Proteins, Signal TransducingHistonesLAMTOR2 protein, humanMorpholinosRNA, MessengerRNA, Small NuclearRNA Splice SitesU1 small nuclear RNA

Identifiers

PMID22968171
PMCPMC3474926
OpenAlexW2152737152

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.