Evidence map›Paper›PMID 22966123›Full record

ArticleThe Journal of infectious diseases2012

Risk factors for efflux pump overexpression in fluoroquinolone-resistant Escherichia coli.

Jennifer H Han, Irving Nachamkin, Pam Tolomeo, Xiangqun Mao, Warren B Bilker, Ebbing Lautenbach

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in The Journal of infectious diseases, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jennifer H HanDivision of Infectious Diseases, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA. jennifer.han@uphs.upenn.edu
Irving Nachamkin
Pam Tolomeo
Xiangqun Mao
Warren B Bilker
Ebbing Lautenbach
University of Pennsylvania · USOffice of Infectious Diseases · US

Funding

Clinical Impact of Quinolone-Resistant E.coli carriageR01AI055008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI LAUTENBACH, EBBING · 2004 to 2007
$2.6M
Mentoring and patient-oriented research in antimicrobial resistanceK24AI080942 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI LAUTENBACH, EBBING · 2009 to 2013
$853k
DRS NIH HHS RS1/CCR320627-01NCEZID CDC HHS U54 CK000163NCEZID CDC HHS U54-CK000163NIAID NIH HHS K24 AI080942NIAID NIH HHS R01 AI055008
6 · The paper itself

Abstract

backgroundWe conducted a case-control study to identify risk factors for efflux overexpression, an important mechanism of fluoroquinolone resistance, among patients with fluoroquinolone-resistant Escherichia coli (FQREC) gastrointestinal tract colonization.

methodsThree annual fecal surveillance surveys were performed hospital-wide, and all patients colonized with FQREC (levofloxacin minimum inhibitory concentration, ≥8 μg/mL) were included in the study. Cases and controls were defined on the basis of overexpression of the AcrAB efflux pump, as measured by the organic solvent tolerance (OST) assay. A multivariable logistic regression model was developed to identify risk factors for OST positivity among patients with FQREC colonization.

resultsEighty-nine patients were colonized with FQREC: 44 (49.4%) and 45 (50.6%) patients had isolates that were OST-positive and OST-negative, respectively. On multivariable analyses, location on the surgical service was significantly associated with recovery of an OST-positive isolate (odds ratio, 7.36; 95% confidence interval, 1.82-29.7; P = .005). Furthermore, patients who had received a first-generation cephalosporin in the 30 days prior to sampling were less likely to have an OST-positive isolate (odds ratio, 0.20; 95% confidence interval, .04-.94; P = .04).

conclusionsAmong phenotypically identical FQREC isolates, different factors may drive the emergence of different resistance mechanisms. Further studies are needed to elucidate the relationship between antimicrobial use and specific resistance mechanisms.

Indexed as

Anti-Bacterial AgentsCase-Control StudiesDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsFecesFluoroquinolonesGastrointestinal DiseasesGene Expression Regulation, BacterialHumansMembrane Transport ProteinsPennsylvaniaRisk FactorsAnti-Bacterial AgentsFluoroquinolonesMembrane Transport Proteins

Identifiers

PMID22966123
PMCPMC3475638
OpenAlexW2032675291

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.