Evidence map›Paper›PMID 22965132›Full record

ArticleNucleic acids research2012

Common chaperone activity in the G-domain of trGTPase protects L11-L12 interaction on the ribosome.

Dandan Zhang, Guangqiao Liu, Jiaying Xue, Jizhong Lou, Knud H Nierhaus, Weimin Gong, Yan Qin

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. The GTPase BipA expressed at low temperature inThe Journal of biological chemistry · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Dandan ZhangLaboratory of Noncoding RNA, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing 100101, China.
Guangqiao Liu
Jiaying Xue
Jizhong Lou
Knud H Nierhaus
Weimin Gong
Yan Qin
Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Translational GTPases (trGTPases) regulate all phases of protein synthesis. An early event in the interaction of a trGTPase with the ribosome is the contact of the G-domain with the C-terminal domain (CTD) of ribosomal protein L12 (L12-CTD) and subsequently interacts with the N-terminal domain of L11 (L11-NTD). However, the structural and functional relationships between L12-CTD and L11-NTD remain unclear. Here, we performed mutagenesis, biochemical and structural studies to identify the interactions between L11-NTD and L12-CTD. Mutagenesis of conserved residues in the interaction site revealed their role in the docking of trGTPases. During docking, loop62 of L11-NTD protrudes into a cleft in L12-CTD, leading to an open conformation of this domain and exposure of hydrophobic core. This unfavorable situation for L12-CTD stability is resolved by a chaperone-like activity of the contacting G-domain. Our results suggest that all trGTPases-regardless of their different specific functions-use a common mechanism for stabilizing the L11-NTD•L12-CTD interactions.

Indexed as

Escherichia coliEscherichia coli ProteinsGTP-Binding ProteinsGTP Phosphohydrolase-Linked Elongation FactorsHydrophobic and Hydrophilic InteractionsModels, MolecularMolecular ChaperonesPeptide Elongation Factor GPeptide Initiation FactorsProtein Interaction Domains and MotifsRibosomal ProteinsRibosomesStatic ElectricityTranscriptional Elongation FactorsEscherichia coli ProteinsGTP-Binding ProteinsGTP Phosphohydrolase-Linked Elongation FactorsLepA protein, E coliMolecular ChaperonesPeptide Elongation Factor GPeptide Initiation Factorsribosomal protein L11Ribosomal ProteinsrplK protein, E colirplL protein, E coliTranscriptional Elongation Factors

Identifiers

PMID22965132
PMCPMC3505967
OpenAlexW2095166412

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.