Evidence map›Paper›PMID 22962947›Full record

ArticleBMC biochemistry2012

The role of molecular chaperonins in warm ischemia and reperfusion injury in the steatotic liver: a proteomic study.

Venkataswarup Tiriveedhi, Kendra D Conzen, Jane Liaw-Conlin, Gundumi Upadhya, James Malone, R Reid Townsend, Robnet Kerns, Jianluo Jia, Krista Csontos, Sabarinathan Ramachandran and 3 more

Open access · hybridAbstract read
In one paragraph

Article in BMC biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Venkataswarup TiriveedhiDepartment of Surgery, Washington University in St Louis, School of Medicine, St Louis, MO, USA. venkataswarupt@wudosis.wustl.edu
Kendra D Conzen
Jane Liaw-Conlin
Gundumi Upadhya
James Malone
R Reid Townsend
Robnet Kerns
Jianluo Jia
Krista Csontos
Sabarinathan Ramachandran
Thallachallour Mohanakumar
Christopher D Anderson
William C Chapman
Washington University in St. Louis · USJackson Memorial Hospital · US

Funding

Washington University Institute of Clinical and Translational Sciences (UL1)UL1RR024992 · NCRR · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2007 to 2011
$45.4M
Washington University Institute of Clinical and Translational SciencesUL1TR000448 · NCATS · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2012 to 2016
$41.4M
YOGA LIFESTYLE INTERVENTION REDUCES BLOOD PRESSURE IN HIV-INFECTED ADULTSP41RR000954 · NCRR · WASHINGTON UNIVERSITY · PI GROSS, MICHAEL L · 1985 to 2011
$16.0M
Role of Eicosanoids In Modulating Endotoxin Induced LiveP01HL066196 · NHLBI · VANDERBILT UNIVERSITY · PI BRIGHAM, KENNETH L · 2002 to 2006
$9.0M
NCATS NIH HHS UL1 TR000448NCI NIH HHS 5T32CA00962120NCRR NIH HHS P41 RR00954NCRR NIH HHS UL1 RR024992NHLBI NIH HHS P01 HL66196-01
6 · The paper itself

Abstract

backgroundThe molecular basis of the increased susceptibility of steatotic livers to warm ischemia/reperfusion (I/R) injury during transplantation remains undefined. Animal model for warm I/R injury was induced in obese Zucker rats. Lean Zucker rats provided controls. Two dimensional differential gel electrophoresis was performed with liver protein extracts. Protein features with significant abundance ratios (p < 0.01) between the two cohorts were selected and analyzed with HPLC/MS. Proteins were identified by Uniprot database. Interactive protein networks were generated using Ingenuity Pathway Analysis and GRANITE software.

resultsThe relative abundance of 105 proteins was observed in warm I/R injury. Functional grouping revealed four categories of importance: molecular chaperones/endoplasmic reticulum (ER) stress, oxidative stress, metabolism, and cell structure. Hypoxia up-regulated 1, calcium binding protein 1, calreticulin, heat shock protein (HSP) 60, HSP-90, and protein disulfide isomerase 3 were chaperonins significantly (p < 0.01) down-regulated and only one chaperonin, HSP-1 was significantly upregulated in steatotic liver following I/R.

conclusionDown-regulation of the chaperones identified in this analysis may contribute to the increased ER stress and, consequently, apoptosis and necrosis. This study provides an initial platform for future investigation of the role of chaperones and therapeutic targets for increasing the viability of steatotic liver allografts.

Indexed as

ProteomicsAnimalsChromatography, High Pressure LiquidDatabases, ProteinDown-RegulationElectrophoresis, Gel, Two-DimensionalEndoplasmic Reticulum StressFatty LiverMaleMass SpectrometryMolecular ChaperonesProteomeRatsRats, ZuckerReperfusion InjuryUp-RegulationMolecular ChaperonesProteome

Identifiers

PMID22962947
PMCPMC3445822
OpenAlexW2032148900

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.