ArticlePlant cell reports2012
Revealing genetic diversity of tree peonies at micro-evolution level with hyper-variable chloroplast markers and floral traits.
Article in Plant cell reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed.
- Functional Analysis of the PoSERK-Interacting Protein PorbcL in the Embryogenic Callus Formation of Tree Peony (Plants (Basel, Switzerland) · 2024Article
- Development and Characterization of Microsatellite Markers Based on the Chloroplast Genome of Tree Peony.Genes · 2022Article
- Article
- Primer Design for the Analysis of Closely Related Species: Application of Noncoding mtDNA and cpDNA Sequences.Methods in molecular biology (Clifton, N.J.) · 2022Article
- SPInDel Analysis of the Non-Coding Regions of cpDNA as a More Useful Tool for the Identification of Rye (Poaceae:International journal of molecular sciences · 2020Article
- Comparative analyses of chloroplast genomes from 13 Lagerstroemia (Lythraceae) species: identification of highly divergent regions and inference of phylogenetic relationships.Plant molecular biology · 2020Article
- Article
- Comparison of different annotation tools for characterization of the complete chloroplast genome of Corylus avellana cv Tombul.BMC genomics · 2019Article
- Late Pleistocene speciation of three closely related tree peonies endemic to the Qinling-Daba Mountains, a major glacial refugium in Central China.Ecology and evolution · 2019Article
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- Article
- Article
- Interspecific chloroplast genome sequence diversity and genomic resources in Diospyros.BMC plant biology · 2018Article
- Comparative Genomics and Phylogenetic Analysis Revealed the Chloroplast Genome Variation and Interspecific Relationships ofFrontiers in plant science · 2018Article
- The Complete Chloroplast Genome Sequences of Aconitum pseudolaeve and Aconitum longecassidatum, and Development of Molecular Markers for Distinguishing Species in the Aconitum Subgenus Lycoctonum.Molecules (Basel, Switzerland) · 2017Article
- Comparative Analysis of SixFrontiers in plant science · 2017Article
- Phylogenetic Resolution inFrontiers in plant science · 2017Article
- Article
- A new nuclear DNA marker from ubiquitin ligase gene region for genetic diversity detection of walnut germplasm resources.Biotechnology reports (Amsterdam, Netherlands) · 2015Article
Corrections and comments
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageHighly variable regions of chloroplast genome were found to be useful in the detection of plant genetic diversity at micro-evolution level. Our methodology will improve understanding and conservation of plant diversity. Tree peonies are famous flowers with about 2,000 cultivars in the world, belonging to Paeonia sect. Moutan of the Paeoniaceae. They are traditionally classified based on flower forms and colors. Due to the limited number of DNA and morphological markers, and the existence of synonyms and homonyms, evaluation on genetic diversity of so many cultivars remains a challenge. In most cases, it is difficult and even impossible to discriminate tree peony cultivars when they are not in flower. In this study, single nucleotide polymorphism detected from the hyper-variable regions of chloroplast genome was employed to separate tree peony cultivars into different maternal lineages which can be expressed briefly by a nucleotide molecular formula. Our approach enabled a much higher resolution of cultivar identification and classification that has not been obtained before. The newly developed hyper-variable chloroplast markers, as an independent source of taxonomic characteristics, provided novel evidences and higher resolution ability that are helpful in building an effective classification system for evaluation, conservation, and utilization of the tree peony germplasm resources at cultivar level.
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