Evidence map›Paper›PMID 22957700›Full record

ArticleBiochemistry2012

Heme binding properties of glyceraldehyde-3-phosphate dehydrogenase.

Luciana Hannibal, Daniel Collins, Julie Brassard, Ritu Chakravarti, Rajesh Vempati, Pierre Dorlet, Jérôme Santolini, John H Dawson, Dennis J Stuehr

Abstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Article
  3. Key roles of GAPDH, Hsp90, and NO in heme trafficking.Journal of inorganic biochemistry · 2026
    Review
  4. Article
  5. Article
  6. Update on heme biosynthesis, tissue-specific regulation, heme transport, relation to iron metabolism and cellular energy.Liver international : official journal of the International Association for the Study of the Liver · 2024
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. GAPDH is involved in the heme-maturation of myoglobin and hemoglobin.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
  20. NO rapidly mobilizes cellular heme to trigger assembly of its own receptor.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Luciana HannibalDepartment of Pathobiology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195, USA.
Daniel Collins
Julie Brassard
Ritu Chakravarti
Rajesh Vempati
Pierre Dorlet
Jérôme Santolini
John H Dawson
Dennis J Stuehr
Cleveland Clinic Lerner College of Medicine · USCEA Paris-Saclay · FRUniversity of South Carolina · USAgriculture and Agri-Food Canada · CA

Funding

Clinical and Translational Science Collaborative of ClevelandUL1TR000439 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$50.0M
Structural Determinants Of Ceruloplasmin Inflammatory ActivityP01HL076491 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI PLOW, EDWARD FRANKLIN · 2004 to 2019
$27.3M
CONTROL MECHANISMS OF THE NITRIC OXIDE SYNTHASESR01GM051491 · NIGMS · CLEVELAND CLINIC LERNER COM-CWRU · PI STUEHR, DENNIS J · 1994 to 2016
$5.1M
BIOCHEMISTRY OF NITRIC OXIDE SYNTHESISR01CA053914 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI STUEHR, DENNIS J · 1996 to 2010
$3.1M
SPECTROSCOPY AND MECHANISMS OF HEME-IRON OXYGENASESR01GM026730 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI DAWSON, JOHN H · 1985 to 2009
$2.1M
New mechanism and regulation of intracellular heme delivery in mammalsR01GM097041 · NIGMS · CLEVELAND CLINIC LERNER COM-CWRU · PI STUEHR, DENNIS J · 2011 to 2014
$1.2M
NCATS NIH HHS UL1 TR000439NCI NIH HHS R01 CA053914NHLBI NIH HHS HL76491NHLBI NIH HHS P01 HL076491NIGMS NIH HHS GM26730NIGMS NIH HHS GM51491NIGMS NIH HHS GM97041NIGMS NIH HHS R01 GM026730NIGMS NIH HHS R01 GM051491NIGMS NIH HHS R01 GM097041
6 · The paper itself

Abstract

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is a glycolytic enzyme that also functions in transcriptional regulation, oxidative stress, vesicular trafficking, and apoptosis. Because GAPDH is required for the insertion of cellular heme into inducible nitric oxide synthase [Chakravarti, R., et al. (2010) Proc. Natl. Acad. Sci. U.S.A. 107, 18004-18009], we extensively characterized the heme binding properties of GAPDH. Substoichiometric amounts of ferric heme bound to GAPDH (one heme per GAPDH tetramer) to form a low-spin complex with UV-visible maxima at 362, 418, and 537 nm and when reduced to ferrous gave maxima at 424, 527, and 559 nm. Ferric heme association and dissociation rate constants at 10 °C were as follows: k(on) = 17800 M(-1) s(-1), k(off1) = 7.0 × 10(-3) s(-1), and k(off2) = 3.3 × 10(-4) s(-1) (giving approximate affinities of 19-390 nM). Ferrous heme bound more poorly to GAPDH and dissociated with a k(off) of 4.2 × 10(-3) s(-1). Magnetic circular dichroism, resonance Raman, and electron paramagnetic resonance spectroscopic data on the ferric, ferrous, and ferrous-CO complexes of GAPDH showed that the heme is bis-ligated with His as the proximal ligand. The distal ligand in the ferric complex was not displaced by CN(-) or N(3)(-) but in the ferrous complex could be displaced by CO at a rate of 1.75 s(-1) (for >0.2 mM CO). Studies with heme analogues revealed selectivity toward the coordinating metal and porphyrin ring structure. The GAPDH-heme complex was isolated from bacteria induced to express rabbit GAPDH in the presence of δ-aminolevulinic acid. Our finding of heme binding to GAPDH expands the protein's potential roles. The strength, selectivity, reversibility, and redox sensitivity of heme binding to GAPDH are consistent with it performing heme sensing or heme chaperone-like functions in cells.

Indexed as

AnimalsCarbon MonoxideCircular DichroismElectron Spin Resonance SpectroscopyFerric CompoundsFerrous CompoundsGlyceraldehyde-3-Phosphate DehydrogenasesHemeHumansLigandsOxidation-ReductionPorphyrinsPotentiometryProtein BindingProtein Structure, SecondaryRabbitsCarbon MonoxideFerric CompoundsFerrous CompoundsGlyceraldehyde-3-Phosphate DehydrogenasesHemeLigandsPorphyrins

Identifiers

PMID22957700
PMCPMC3549054
OpenAlexW2075572654

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.